RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 HRO43593 1189 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 KIR2DL3P43628 341 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 CSNK1G2P78368 415 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 ID2Q02363 134 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 KLHL12Q53G59 568 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 ASB18Q6ZVZ8 466 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 KLBQ86Z14 1044 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 KLHDC8AQ8IYD2 350 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 CHAC2Q8WUX2 184 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 SECISBP2Q96T21 854 aaKnown RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 POLDIP3Q9BY77 421 aaKnown RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 EPHX3Q9H6B9 360 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 FZD3Q9NPG1 666 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 FAM240BA0A1B0GVZ2 78 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 A0A1W2PRQ8 180 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 ARRDC5A6NEK1 342 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 HOXC11O43248 304 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 RGS8P57771 180 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 TAS2R38P59533 333 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 CDK3Q00526 305 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 KLHL22Q53GT1 634 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 RD3Q7Z3Z2 195 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 NRMQ8IXM6 262 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 MRPL43Q8N983 215 aaKnown RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 TP53I13Q8NBR0 393 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 NEIL3Q8TAT5 605 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 SMAP2Q8WU79 429 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 CNRIP1Q96F85 164 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 PPP1R16AQ96I34 528 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 MED20Q9H944 212 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 H2AFY2Q9P0M6 372 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 NFKBIL1Q9UBC1 381 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 GPSM3Q9Y4H4 160 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 LOC102723532A0A0G2JNH3 316 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 PIP5K1CO60331 668 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 ADH1CP00326 375 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 CISD3P0C7P0 127 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 RPS7P62081 194 aaKnown RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 TGM3Q08188 693 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 THOC7Q6I9Y2 204 aaKnown RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 SLC36A4Q6YBV0 504 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 PLEKHM3Q6ZWE6 761 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 FAM26EQ8N5C1 309 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 SIMC1Q8NDZ2 872 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 FAM83CQ9BQN1 747 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 FAIM2Q9BWQ8 316 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 HDHD2Q9H0R4 259 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 SEMA4GQ9NTN9 838 aa13.72□□□□□ -0.21
SCARB2-221ENST00000640341 CXXC1Q9P0U4 656 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 TCF20Q9UGU0 1960 aaKnown RBP13.72□□□□□ -0.21
SCARB2-221ENST00000640341 C17orf113A0A1B0GUU1 675 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 A0A1W2PR48 441 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 B4DXG7 233 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 C4orf51C9J302 202 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 NDUFB5O43674 189 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 NARSO43776 548 aaKnown RBP13.71□□□□□ -0.21
SCARB2-221ENST00000640341 AHRP35869 848 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 KHKP50053 298 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 CTBP2P56545 445 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 CSTF1Q05048 431 aaKnown RBP13.71□□□□□ -0.21
SCARB2-221ENST00000640341 WSCD2Q2TBF2 565 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 C6orf132Q5T0Z8 1188 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 GDPGP1Q6ZNW5 385 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 CITED4Q96RK1 184 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 INSM2Q96T92 566 aaPredicted RBP13.71□□□□□ -0.21
SCARB2-221ENST00000640341 RPRD1BQ9NQG5 326 aaKnown RBP13.71□□□□□ -0.21
SCARB2-221ENST00000640341 PTGFRNQ9P2B2 879 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 GPR34Q9UPC5 381 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 CHD9Q3L8U1 2897 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 PRODHO43272 600 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 PLOD3O60568 738 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 RPN2P04844 631 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 TRHRP34981 398 aaPredicted RBP13.71□□□□□ -0.21
SCARB2-221ENST00000640341 TRIM23P36406 574 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 BCL6P41182 706 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 FUT5Q11128 374 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 OCLNQ16625 522 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 NDUFA5Q16718 116 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 CCNJQ5T5M9 372 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 FCRLBQ6BAA4 426 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 ACOT4Q8N9L9 421 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 LILRB4Q8NHJ6 448 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 RHBGQ9H310 441 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 RNF121Q9H920 327 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 ALPK3Q96L96 1907 aa13.71□□□□□ -0.21
SCARB2-221ENST00000640341 MN1Q10571 1320 aaPredicted RBP13.71□□□□□ -0.21
SCARB2-221ENST00000640341 ANKRD34BA5PLL1 514 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 LRIT2A6NDA9 550 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 ISM1B1AKI9 464 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 SLC9A3R1O14745 358 aaPredicted RBP13.71□□□□□ -0.22
SCARB2-221ENST00000640341 VEGFDO43915 354 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 IL1AP01583 271 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 EIF2S1P05198 315 aaKnown RBP13.71□□□□□ -0.22
SCARB2-221ENST00000640341 IL12RB1P42701 662 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 STXBP1P61764 594 aaKnown RBP13.71□□□□□ -0.22
SCARB2-221ENST00000640341 TATDN3Q17R31 274 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 TMEM201Q5SNT2 666 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 IDNKQ5T6J7 187 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 LCN1P1Q5VSP4 162 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 PRRC1Q96M27 445 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms