RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 EGR3Q06889 387 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TRAF3Q13114 568 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF235Q14590 738 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF460Q14592 562 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 OR2G6Q5TZ20 316 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 NADSYN1Q6IA69 706 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 C3P1Q6ZMU1 363 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF100Q8IYN0 542 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TP53I13Q8NBR0 393 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 OR4C5Q8NGB2 326 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 OR4K14Q8NGD5 310 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 OR6K3Q8NGY3 331 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 DNASE1L2Q92874 299 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SFRP2Q96HF1 295 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 COQ10AQ96MF6 247 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TECTBQ96PL2 329 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PTPN18Q99952 460 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PCDHAC1Q9H158 963 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 FBXO5Q9UKT4 447 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 C14orf166Q9Y224 244 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PCDHA9Q9Y5H5 950 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PCDHA2Q9Y5H9 948 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PCDHA13Q9Y5I0 950 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 V9GYS6 101 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 CDK12Q9NYV4 1490 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SEC16AO15027 2179 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 AGAP14A8MT82 685 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 C9JVG2 144 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 H3BNC9 293 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 GRID2O43424 1007 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 CPN1P15169 458 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 DRD1P21728 446 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SEMG2Q02383 582 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 CNTN1Q12860 1018 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PEA15Q15121 130 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 C5orf64Q2M2E5 130 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SLC22A6Q4U2R8 563 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 LRRC56Q8IYG6 542 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 BPIFB6Q8NFQ5 453 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 STXBP6Q8NFX7 210 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PHOSPHO1Q8TCT1 267 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 RNF133Q8WVZ7 376 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 DIO2Q92813 273 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF775Q96BV0 537 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 MS4A3Q96HJ5 214 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SLC38A3Q99624 504 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 GTSE1Q9NYZ3 720 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 MRTO4Q9UKD2 239 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SCML1Q9UN30 329 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 THADAQ6YHU6 1953 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PSMD10O75832 226 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 NR2F6P10588 404 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 OSMP13725 252 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 BCKDHBP21953 392 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 CERS1P27544 350 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 AVPR2P30518 371 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 INPP1P49441 399 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ST8SIA6P61647 398 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SIGLEC14Q08ET2 396 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 NR6A1Q15406 480 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SLC39A5Q6ZMH5 540 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 QSOX2Q6ZRP7 698 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 CXXC5Q7LFL8 322 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TAS1R1Q7RTX1 841 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PLPPR4Q7Z2D5 763 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TMEM135Q86UB9 458 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 CIR1Q86X95 450 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 CBWD2Q8IUF1 395 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ATG4AQ8WYN0 398 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 FYTTD1Q96QD9 318 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 AARSD1Q9BTE6 412 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 URM1Q9BTM9 101 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 OR2AG1Q9H205 316 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 DCSTAMPQ9H295 470 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 DHCR7Q9UBM7 475 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 FBXO7Q9Y3I1 522 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TBL2Q9Y4P3 447 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 BACE2Q9Y5Z0 518 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 M0R296 226 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 OGG1O15527 345 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 FTH1P02794 183 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 ZNF35P13682 527 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 CD200P41217 278 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 IDH2P48735 452 aaKnown RBP4.09□□□□□ -1.76
SCN3A-209ENST00000639244 SLC18A1P54219 525 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 RPS6P62753 249 aaKnown RBP4.09□□□□□ -1.76
SCN3A-209ENST00000639244 EIF5AP63241 154 aaKnown RBP4.09□□□□□ -1.76
SCN3A-209ENST00000639244 VAMP3Q15836 100 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 EIF5AL1Q6IS14 154 aaKnown RBP4.09□□□□□ -1.76
SCN3A-209ENST00000639244 PRSS55Q6UWB4 352 aaPredicted RBP4.09□□□□□ -1.76
SCN3A-209ENST00000639244 COLGALT1Q8NBJ5 622 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 ARRDC3Q96B67 414 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 PANX1Q96RD7 426 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 C6orf50Q9HD87 102 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 XPNPEP3Q9NQH7 507 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 WNT16Q9UBV4 365 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 PADI1Q9ULC6 663 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 LMTK3Q96Q04 1460 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 SOWAHBA6NEL2 793 aa4.09□□□□□ -1.76
SCN3A-209ENST00000639244 C1QTNF3-AMACRE9PGA6 284 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms