RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 LINC00299Q6ZSB3 139 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 ZNF367Q7RTV3 350 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 OR2L13Q8N349 312 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 OR8J1Q8NGP2 316 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 TOE1Q96GM8 510 aaKnown RBP20.14■□□□□ 0.82
CLN6-224ENST00000638076 OR5M11Q96RB7 305 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 SLIRPQ9GZT3 109 aaKnown RBP20.14■□□□□ 0.82
CLN6-224ENST00000638076 MKLN1Q9UL63 735 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 CPSF4LA6NMK7 179 aaKnown RBP20.14■□□□□ 0.81
CLN6-224ENST00000638076 RPLP0P05388 317 aaKnown RBP20.14■□□□□ 0.81
CLN6-224ENST00000638076 AVPR1BP47901 424 aa20.14■□□□□ 0.81
CLN6-224ENST00000638076 RGS6P49758 472 aa20.14■□□□□ 0.81
CLN6-224ENST00000638076 KIAA0895LQ68EN5 471 aa20.14■□□□□ 0.81
CLN6-224ENST00000638076 USP53Q70EK8 1073 aa20.14■□□□□ 0.81
CLN6-224ENST00000638076 BCDIN3DQ7Z5W3 292 aaKnown RBP20.14■□□□□ 0.81
CLN6-224ENST00000638076 BTLAQ7Z6A9 289 aa20.14■□□□□ 0.81
CLN6-224ENST00000638076 TAF8Q7Z7C8 310 aa20.14■□□□□ 0.81
CLN6-224ENST00000638076 ZNF761Q86XN6 746 aaPredicted RBP20.14■□□□□ 0.81
CLN6-224ENST00000638076 OR52P1PQ8NH57 321 aa20.14■□□□□ 0.81
CLN6-224ENST00000638076 WDR36Q8NI36 951 aaKnown RBP20.14■□□□□ 0.81
CLN6-224ENST00000638076 KLK4Q9Y5K2 254 aa20.14■□□□□ 0.81
CLN6-224ENST00000638076 MTCH2Q9Y6C9 303 aa20.14■□□□□ 0.81
CLN6-224ENST00000638076 A0A087WUU8 490 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 ZSCAN9O15535 394 aaPredicted RBP20.13■□□□□ 0.81
CLN6-224ENST00000638076 CYP7B1O75881 506 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 CPMP14384 443 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 FRRS1Q6ZNA5 592 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 MEX3DQ86XN8 651 aaKnown RBP20.13■□□□□ 0.81
CLN6-224ENST00000638076 WDR12Q9GZL7 423 aaKnown RBP20.13■□□□□ 0.81
CLN6-224ENST00000638076 IFT52Q9Y366 437 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 A0A0J9YY10 115 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 PORP16435 677 aaPredicted RBP20.13■□□□□ 0.81
CLN6-224ENST00000638076 PRKAR1BP31321 381 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 PPP1CAP62136 330 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 HOXC5Q00444 222 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 ITGADQ13349 1161 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 TRMT12Q53H54 448 aaKnown RBP20.13■□□□□ 0.81
CLN6-224ENST00000638076 CLIP4Q8N3C7 705 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 OR6Q1Q8NGQ2 317 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 DOK4Q8TEW6 326 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 S100ZQ8WXG8 99 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 OR51E2Q9H255 320 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 LYRM4Q9HD34 91 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 FBXO8Q9NRD0 319 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 PTGFRNQ9P2B2 879 aa20.13■□□□□ 0.81
CLN6-224ENST00000638076 PRUNE2Q8WUY3 3088 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 KIR2DS5A0A0G2JLQ3 304 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 A0A0G2JNG1 304 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 LOC100506127A0A0U1RQW1 187 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 SPTY2D1-AS1A0A0U1RR47 76 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 FAM221BA6H8Z2 402 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 KIR2DS3K7RE56 304 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 LDB3O75112 727 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 THEGLP0DJG4 465 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 ZNF12P17014 697 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 TRHRP34981 398 aaPredicted RBP20.12■□□□□ 0.81
CLN6-224ENST00000638076 SOX18P35713 384 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 UGT2B10P36537 528 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 CCR5P51681 352 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 RELAQ04206 551 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 GINS1Q14691 196 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 KIR2DS5Q14953 304 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 ENTPD8Q5MY95 495 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 MFSD4BQ5TF39 518 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 RSC1A1Q92681 617 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 DIO2Q92813 273 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 SLC6A18Q96N87 628 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 SEMA4GQ9NTN9 838 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 KLHL28Q9NXS3 571 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 B3GNT3Q9Y2A9 372 aa20.12■□□□□ 0.81
CLN6-224ENST00000638076 TLX2O43763 284 aaPredicted RBP20.11■□□□□ 0.81
CLN6-224ENST00000638076 PRKYO43930 277 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 AGR2O95994 175 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 CCNYL3P0C7X3 344 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 GIPRP48546 466 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 TUBA1BP68363 451 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 C1orf61Q13536 156 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 FZD2Q14332 565 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 DUSP5Q16690 384 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 TUBA1AQ71U36 451 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 RNF44Q7L0R7 432 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 CACTIN-AS1Q8N1I8 211 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 ZNF655Q8N720 491 aaPredicted RBP20.11■□□□□ 0.81
CLN6-224ENST00000638076 OR5T3Q8NGG3 340 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 MGLLQ99685 303 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 GPR174Q9BXC1 333 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 TRIM45Q9H8W5 580 aaPredicted RBP20.11■□□□□ 0.81
CLN6-224ENST00000638076 PRDM9Q9NQV7 894 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 ERGIC3Q9Y282 383 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 RPL36Q9Y3U8 105 aaKnown RBP20.11■□□□□ 0.81
CLN6-224ENST00000638076 OR5K4A6NMS3 321 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 NTN1O95631 604 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 CTSEP14091 401 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 GSTM3P21266 225 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 TRAM2Q15035 370 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 ZNF628Q5EBL2 1059 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 TYW3Q6IPR3 259 aaKnown RBP20.11■□□□□ 0.81
CLN6-224ENST00000638076 ACSM5Q6NUN0 579 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 USP43Q70EL4 1123 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 TMEM52Q8NDY8 209 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms