RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 RNF128Q8TEB7 428 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 C16orf78Q8WTQ4 265 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 ARRDC3Q96B67 414 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 ZNF597Q96LX8 424 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 KREMEN1Q96MU8 473 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 CMTM3Q96MX0 182 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 GINS3Q9BRX5 216 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 TSSK6Q9BXA6 273 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 PIGVQ9NUD9 493 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 SPHK1Q9NYA1 384 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 CPNE7Q9UBL6 633 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 TRGV8A0A0C4DH27 118 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 PRSS51A0A1B0GVH4 220 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 F5H5K5 113 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 H7C1Q1 480 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 SYT7O43581 403 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 LGI1O95970 557 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 ARHGAP19Q14CB8 494 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 RTL6Q6ICC9 239 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 FRMPD2BQ6IN97 320 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 NIPAL3Q6P499 406 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 ZNF784Q8NCA9 323 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-217ENST00000637988 OR51T1Q8NGJ9 327 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 CLEC4CQ8WTT0 213 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 TMEM80Q96HE8 168 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 ZNF681Q96N22 645 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 DTLQ9NZJ0 730 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 PDE10AQ9Y233 779 aa5.83□□□□□ -1.48
SCN1A-217ENST00000637988 A8MXE2 369 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 RNASET2O00584 256 aaKnown RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 AHCYL1O43865 530 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 DNAJB6O75190 326 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CBX7O95931 251 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 GSTP1P09211 210 aaKnown RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TUBG1P23258 451 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CYB561P49447 251 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 FXYD6P3P58550 94 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 GPLD1P80108 840 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SLC10A1Q14973 349 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 EARS2Q5JPH6 523 aaKnown RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CMIPQ8IY22 773 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ZNF454Q8N9F8 522 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 OR51D1Q8NGF3 324 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CREB3L4Q8TEY5 395 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SLC6A7Q99884 636 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PHF7Q9BWX1 381 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ALOXE3Q9BYJ1 711 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SLC7A7Q9UM01 511 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 NUMBLQ9Y6R0 609 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 NUP205Q92621 2012 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TTC24A2A3L6 582 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 H7C2Y5 167 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 FLRT2O43155 660 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 FMO6PO60774 539 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ADAM23O75077 832 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TGM6O95932 706 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 HLA-DPB1P04440 258 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 DCTP40126 519 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ADGRE1Q14246 886 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 GAS6Q14393 721 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CDNFQ49AH0 187 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 HSD17B12Q53GQ0 312 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PPM1JQ5JR12 505 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 MEDAGQ5VYS4 303 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CDCA2Q69YH5 1023 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 NXPE4Q6UWF7 544 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TMEM207Q6UWW9 146 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CDHR3Q6ZTQ4 885 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ADIPOR2Q86V24 386 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 OR52P1PQ8NH57 321 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ZNF566Q969W8 418 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TEPSINQ96N21 525 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TMEM43Q9BTV4 400 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CCM2LQ9NUG4 571 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 OXSMQ9NWU1 459 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PLIN4Q96Q06 1357 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 BTAF1O14981 1849 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 LRIT2A6NDA9 550 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SSX5O60225 188 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 DPM1O60762 260 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 POU2F2P09086 479 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ZNF888P0CJ79 500 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SELEP16581 610 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 UGT3A2Q3SY77 523 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PIGGQ5H8A4 983 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ANKRD54Q6NXT1 300 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 NLRC3Q7RTR2 1065 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TMEM200AQ86VY9 491 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 MRPL43Q8N983 215 aaKnown RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 OR5H2Q8NGV7 314 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 HAVCR2Q8TDQ0 301 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 FAM46BQ96A09 425 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SULT4A1Q9BR01 284 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 WASH6PQ9NQA3 447 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 REXO2Q9Y3B8 237 aaKnown RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 NUP188Q5SRE5 1749 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PMS2P1A4D2B8 440 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 C4orf47A7E2U8 309 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 LOC730098B7Z3J9 87 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 IL2RAP01589 272 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms