RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CT45A8P0DMV1 189 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 CT45A9P0DMV2 189 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 IMPDH1P20839 514 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 FOXF2Q12947 444 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 CT45A2Q5DJT8 189 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 ENPP6Q6UWR7 440 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 GPRIN3Q6ZVF9 776 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 LCA5Q86VQ0 697 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 PLCZ1Q86YW0 608 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 SAMD14Q8IZD0 417 aaPredicted RBP16.78■□□□□ 0.28
CLN6-220ENST00000637450 MNS1Q8NEH6 495 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 RDH11Q8TC12 318 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 KAT2AQ92830 837 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 MTBPQ96DY7 904 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 VSTM2LQ96N03 204 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 TMEM237Q96Q45 408 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 ADOQ96SZ5 270 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 ANKRA2Q9H9E1 313 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 TAS2R10Q9NYW0 307 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 NIPBLQ6KC79 2804 aaeCLIP16.78■□□□□ 0.28
CLN6-220ENST00000637450 MPDZO75970 2070 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 GNG14A0A1W2PPG7 69 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 TSPAN2O60636 221 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 NME6O75414 186 aaPredicted RBP16.77■□□□□ 0.28
CLN6-220ENST00000637450 ATP5F1P24539 256 aaPredicted RBP16.77■□□□□ 0.28
CLN6-220ENST00000637450 SRD5A2P31213 254 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 DGKQP52824 942 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 CORO7P57737 925 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 SRYQ05066 204 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 HEPACAMQ14CZ8 416 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 SPIN4Q56A73 249 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 OR9A2Q8NGT5 310 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 C16orf78Q8WTQ4 265 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 RNF138Q8WVD3 245 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 WNT2BQ93097 391 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 EXOSC8Q96B26 276 aaKnown RBP16.77■□□□□ 0.28
CLN6-220ENST00000637450 MBD6Q96DN6 1003 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 C11orf24Q96F05 449 aaPredicted RBP16.77■□□□□ 0.28
CLN6-220ENST00000637450 APIPQ96GX9 242 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 ZFP3Q96NJ6 502 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 ALPK1Q96QP1 1244 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 TM9SF2Q99805 663 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 G6PC3Q9BUM1 346 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 SFXN3Q9BWM7 321 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 FBXL2Q9UKC9 423 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 MRPS18CQ9Y3D5 142 aaKnown RBP16.77■□□□□ 0.28
CLN6-220ENST00000637450 WIF1Q9Y5W5 379 aa16.77■□□□□ 0.28
CLN6-220ENST00000637450 ACANP16112 2415 aa16.77■□□□□ 0.27
CLN6-220ENST00000637450 KIAA1549Q9HCM3 1950 aa16.77■□□□□ 0.27
CLN6-220ENST00000637450 H0Y3Z8 333 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 PLOD3O60568 738 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 DIAPH2O60879 1101 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 ERN1O75460 977 aaKnown RBP16.76■□□□□ 0.27
CLN6-220ENST00000637450 ABHD2P08910 425 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 CTAGE8P0CG41 777 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 KLK2P20151 261 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 HMOX2P30519 316 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 STARP49675 285 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 HTR6P50406 440 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 LHX2P50458 406 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 PRKAA2P54646 552 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 PSPHP78330 225 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 ACSM2AQ08AH3 577 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 EFR3AQ14156 821 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 ERCC6LQ2NKX8 1250 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 ACSM2BQ68CK6 577 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 GALNT18Q6P9A2 607 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 NPSR1Q6W5P4 371 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 LARP4Q71RC2 724 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLN6-220ENST00000637450 CAMKMTQ7Z624 323 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 IFNEQ86WN2 208 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 SLC22A9Q8IVM8 553 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 CTAGE4Q8IX94 777 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 RBM24Q9BX46 236 aaKnown RBP16.76■□□□□ 0.27
CLN6-220ENST00000637450 FOLH1BQ9HBA9 442 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 SLC35C2Q9NQQ7 365 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 EXPH5Q8NEV8 1989 aa16.76■□□□□ 0.27
CLN6-220ENST00000637450 SERTM1A2A2V5 107 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 CLCA1A8K7I4 914 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 ZIC3O60481 467 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 GOSR1O95249 250 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 ENO1P06733 434 aaKnown RBP16.75■□□□□ 0.27
CLN6-220ENST00000637450 TIA1P31483 386 aaKnown RBP eCLIP16.75■□□□□ 0.271e-5■■■□□ 19.1
CLN6-220ENST00000637450 PNLIPRP2P54317 469 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 GAS1P54826 345 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 PKNOX1P55347 436 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 PPP2R2AP63151 447 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 LCP2Q13094 533 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 KRTAP21-3Q3LHN1 58 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 OR5M10Q6IEU7 315 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 AAGABQ6PD74 315 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 PLXDC2Q6UX71 529 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 PAMR1Q6UXH9 720 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 OR7G2Q8NG99 324 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 ZNF592Q92610 1267 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 INTS12Q96CB8 462 aaKnown RBP16.75■□□□□ 0.27
CLN6-220ENST00000637450 L3HYPDHQ96EM0 354 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 DTNBP1Q96EV8 351 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 PLEKHF2Q9H8W4 249 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 GIMAP4Q9NUV9 329 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms