RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 GPAT3Q53EU6 434 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 VWA2Q5GFL6 755 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 RPS26P11Q5JNZ5 115 aaPredicted RBP14.29□□□□□ -0.12
CLN6-219ENST00000637329 SLC44A2Q8IWA5 706 aaPredicted RBP14.29□□□□□ -0.12
CLN6-219ENST00000637329 COX18Q8N8Q8 333 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 CDS1Q92903 461 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 TSLPQ969D9 159 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 EME1Q96AY2 570 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 SLC35A4Q96G79 324 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 TPD52L3Q96J77 140 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 VSTM2LQ96N03 204 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 ZNF184Q99676 751 aaPredicted RBP14.29□□□□□ -0.12
CLN6-219ENST00000637329 C9orf16Q9BUW7 83 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 ZNF350Q9GZX5 532 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 SLC38A1Q9H2H9 487 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 RUBCNLQ9H714 662 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 CACYBPQ9HB71 228 aaKnown RBP14.29□□□□□ -0.12
CLN6-219ENST00000637329 FOLH1BQ9HBA9 442 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 TOR4AQ9NXH8 423 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 SLC39A1Q9NY26 324 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 IFT80Q9P2H3 777 aaPredicted RBP14.29□□□□□ -0.12
CLN6-219ENST00000637329 MKL2Q9ULH7 1088 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 NUP214P35658 2090 aaPredicted RBP14.29□□□□□ -0.12
CLN6-219ENST00000637329 CCDC187A0A096LP49 1063 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 A8MVJ9 347 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 TMEM229AB2RXF0 380 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 PCDH17O14917 1159 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 CSO75390 466 aaKnown RBP14.28□□□□□ -0.12
CLN6-219ENST00000637329 CST1P01037 141 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 OPN1SWP03999 348 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 KLK3P07288 261 aaPredicted RBP14.28□□□□□ -0.12
CLN6-219ENST00000637329 CCL4P13236 92 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 ITGA2P17301 1181 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 CD247P20963 164 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 HSPA13P48723 471 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 EMDP50402 254 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 POU6F2P78424 691 aaPredicted RBP14.28□□□□□ -0.12
CLN6-219ENST00000637329 KCNC4Q03721 635 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 GK3PQ14409 553 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 ZNF267Q14586 743 aaPredicted RBP14.28□□□□□ -0.12
CLN6-219ENST00000637329 TRIP6Q15654 476 aaKnown RBP14.28□□□□□ -0.12
CLN6-219ENST00000637329 NSDHLQ15738 373 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 DCST2Q5T1A1 773 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 DCAF12Q5T6F0 453 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 AP1ARQ63HQ0 302 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 LPCAT4Q643R3 524 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 UNQ6494/PRO21346Q6UXR6 183 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 IZUMO2Q6UXV1 221 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 VTCN1Q7Z7D3 282 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 AMIGO2Q86SJ2 522 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 TMEM151BQ8IW70 566 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 SVOPLQ8N434 492 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 ZNF615Q8N8J6 731 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 SIMC1Q8NDZ2 872 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 PTPMT1Q8WUK0 201 aaPredicted RBP14.28□□□□□ -0.12
CLN6-219ENST00000637329 OTUB1Q96FW1 271 aaPredicted RBP14.28□□□□□ -0.12
CLN6-219ENST00000637329 C7orf34Q96L11 122 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 COL21A1Q96P44 957 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 ZNF347Q96SE7 839 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 CTRCQ99895 268 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 TACO1Q9BSH4 297 aaKnown RBP14.28□□□□□ -0.12
CLN6-219ENST00000637329 CNPPD1Q9BV87 410 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 ULBP3Q9BZM4 244 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 OR10A5Q9H207 317 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 SEC14L3Q9UDX4 400 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 ERVK-19Q9WJR5 959 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 CLCA3PQ9Y6N3 262 aa14.28□□□□□ -0.12
CLN6-219ENST00000637329 TMEM8BA6NDV4 472 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 OR6C76A6NM76 312 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 C9J4A7 227 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 SYT5O00445 386 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 KIAA0513O60268 411 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 DKK1O94907 266 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 MT-CO3P00414 261 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 MT-ND1P03886 318 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 IGKV3-11P04433 115 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 HEXBP07686 556 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 CD63P08962 238 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 TNNI3P19429 210 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 SSTR4P31391 388 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 TRHRP34981 398 aaPredicted RBP14.27□□□□□ -0.13
CLN6-219ENST00000637329 KCNJ5P48544 419 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 PGDP52209 483 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 EFNA3P52797 238 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 PSPHP78330 225 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 CMPK2Q5EBM0 449 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 MLIPQ5VWP3 458 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 MRPL14Q6P1L8 145 aaKnown RBP14.27□□□□□ -0.13
CLN6-219ENST00000637329 ZNF517Q6ZMY9 492 aaPredicted RBP14.27□□□□□ -0.13
CLN6-219ENST00000637329 FRRS1Q6ZNA5 592 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 RAB11FIP2Q7L804 512 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 MORN4Q8NDC4 146 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 APOBEC4Q8WW27 367 aaKnown RBP14.27□□□□□ -0.13
CLN6-219ENST00000637329 OIT3Q8WWZ8 545 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 PROX1Q92786 737 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 ZNF354BQ96LW1 612 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 SLC46A1Q96NT5 459 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 BTBD9Q96Q07 612 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 TAAR9Q96RI9 348 aa14.27□□□□□ -0.13
CLN6-219ENST00000637329 SPSB2Q99619 263 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms