RNA–Protein interactions for RNA: ENST00000637050.1

CLN3-254, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 1,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-254ENST00000637050 TACO1Q9BSH4 297 aaKnown RBP17.13■□□□□ 0.33
CLN3-254ENST00000637050 DDA1Q9BW61 102 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 VCX3BQ9H321 246 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 SOX17Q9H6I2 414 aaPredicted RBP17.13■□□□□ 0.33
CLN3-254ENST00000637050 WDR54Q9H977 334 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 CCDC187A0A096LP49 1063 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.13■□□□□ 0.33
CLN3-254ENST00000637050 A8MUA0 341 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 DDAH2O95865 285 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 HEXBP07686 556 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 CYC1P08574 325 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 FOXL2P58012 376 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 VLDLRP98155 873 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 PSG6Q00889 435 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 EIF3IQ13347 325 aaKnown RBP17.13■□□□□ 0.33
CLN3-254ENST00000637050 DUSP7Q16829 419 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 LRRC36Q1X8D7 754 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 IQCCQ4KMZ1 466 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 IFI44LQ53G44 452 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 PIWIL3Q7Z3Z3 882 aaKnown RBP17.13■□□□□ 0.33
CLN3-254ENST00000637050 OR14A16Q8NHC5 309 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 C16orf52Q8NHV5 167 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 GPR151Q8TDV0 419 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 RASSF5Q8WWW0 418 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 SDF2Q99470 211 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 BDH2Q9BUT1 245 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 RSPO3Q9BXY4 272 aaPredicted RBP17.13■□□□□ 0.33
CLN3-254ENST00000637050 KLHL4Q9C0H6 718 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 NTN4Q9HB63 628 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 DNAJB9Q9UBS3 223 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 DTX4Q9Y2E6 619 aa17.13■□□□□ 0.33
CLN3-254ENST00000637050 PMS2P1A4D2B8 440 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 TTC36A6NLP5 189 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 ZIC2O95409 532 aaPredicted RBP17.12■□□□□ 0.33
CLN3-254ENST00000637050 AK1P00568 194 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 CST1P01037 141 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 IGKV3-11P04433 115 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 FABP3P05413 133 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 GABRA3P34903 492 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 KCNJ5P48544 419 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 SLC37A1P57057 533 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 CHRNEQ04844 493 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 ZNHIT3Q15649 155 aaPredicted RBP17.12■□□□□ 0.33
CLN3-254ENST00000637050 DCST2Q5T1A1 773 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 LANCL3Q6ZV70 420 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 COX18Q8N8Q8 333 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 CATSPER1Q8NEC5 780 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 GPR32P1Q8NGA4 272 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 SLC2A12Q8TD20 617 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 ZNF721Q8TF20 911 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 PIK3R3Q92569 461 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 DAZLQ92904 295 aaKnown RBP17.12■□□□□ 0.33
CLN3-254ENST00000637050 SPATA5L1Q9BVQ7 753 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 SEC14L3Q9UDX4 400 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 PRODH2Q9UF12 536 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 PISDQ9UG56 409 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 BAG5Q9UL15 447 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 PADI2Q9Y2J8 665 aa17.12■□□□□ 0.33
CLN3-254ENST00000637050 KIF26BQ2KJY2 2108 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 A0A1W2PNU3 283 aaPredicted RBP17.11■□□□□ 0.33
CLN3-254ENST00000637050 PLD2O14939 933 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 FCMRO60667 390 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 ALOX12BO75342 701 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 JMJD7P0C870 316 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 EMP2P54851 167 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 POU6F2P78424 691 aaPredicted RBP17.11■□□□□ 0.33
CLN3-254ENST00000637050 HPCAP84074 193 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 GRAMD1BQ3KR37 738 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 AP1ARQ63HQ0 302 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 FAM198BQ6UWH4 519 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 FRRS1Q6ZNA5 592 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 KBTBD2Q8IY47 623 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 ZNF321PQ8N8H1 164 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 ICA1LQ8NDH6 482 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 APOBEC4Q8WW27 367 aaKnown RBP17.11■□□□□ 0.33
CLN3-254ENST00000637050 GEMIN6Q8WXD5 167 aaKnown RBP17.11■□□□□ 0.33
CLN3-254ENST00000637050 MR1Q95460 341 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 EME1Q96AY2 570 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 ART5Q96L15 291 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 ZNF350Q9GZX5 532 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 NXT1Q9UKK6 140 aaKnown RBP17.11■□□□□ 0.33
CLN3-254ENST00000637050 ABCG2Q9UNQ0 655 aa17.11■□□□□ 0.33
CLN3-254ENST00000637050 PRAMEF25A6NGN4 478 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 hCG_2039718K7EN88 272 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 STK17BO94768 372 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 FESP07332 822 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 SLC5A2P31639 672 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 FAAH2Q6GMR7 532 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 TYW3Q6IPR3 259 aaKnown RBP17.1■□□□□ 0.33
CLN3-254ENST00000637050 FAM199XQ6PEV8 388 aaPredicted RBP17.1■□□□□ 0.33
CLN3-254ENST00000637050 TSEN54Q7Z6J9 526 aaKnown RBP17.1■□□□□ 0.33
CLN3-254ENST00000637050 ANKRD37Q7Z713 158 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 GALNT6Q8NCL4 622 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 MORN4Q8NDC4 146 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 SPPL2AQ8TCT8 520 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 SLC46A1Q96NT5 459 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 CIB1Q99828 191 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 OR8D2Q9GZM6 311 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 SAP130Q9H0E3 1048 aa17.1■□□□□ 0.33
CLN3-254ENST00000637050 MTHFD2LQ9H903 347 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms