RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 NCBP2P52298 156 aaKnown RBP eCLIP16.35■□□□□ 0.212e-9■■■■□ 25.4
PNKP-225ENST00000636214 NAGLUP54802 743 aa16.35■□□□□ 0.21
PNKP-225ENST00000636214 NSUN5P2Q63ZY6 315 aa16.35■□□□□ 0.21
PNKP-225ENST00000636214 FRMD7Q6ZUT3 714 aa16.35■□□□□ 0.21
PNKP-225ENST00000636214 SLC44A2Q8IWA5 706 aaPredicted RBP16.35■□□□□ 0.21
PNKP-225ENST00000636214 EIF1ADQ8N9N8 165 aaKnown RBP16.35■□□□□ 0.21
PNKP-225ENST00000636214 SIMC1Q8NDZ2 872 aa16.35■□□□□ 0.21
PNKP-225ENST00000636214 RDH11Q8TC12 318 aa16.35■□□□□ 0.21
PNKP-225ENST00000636214 ADOQ96SZ5 270 aa16.35■□□□□ 0.21
PNKP-225ENST00000636214 IQCGQ9H095 443 aaKnown RBP16.35■□□□□ 0.21
PNKP-225ENST00000636214 FOLH1BQ9HBA9 442 aa16.35■□□□□ 0.21
PNKP-225ENST00000636214 A0A1W2PPM1 405 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 C2orf72A6NCS6 295 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 H0Y3Z8 333 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 PLOD3O60568 738 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 SLITRK5O94991 958 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 CEACAM8P31997 349 aaPredicted RBP16.34■□□□□ 0.21
PNKP-225ENST00000636214 ZNHIT3Q15649 155 aaPredicted RBP16.34■□□□□ 0.21
PNKP-225ENST00000636214 IFNEQ86WN2 208 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 TNIP2Q8NFZ5 429 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 FAM76AQ8TAV0 307 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 MZB1Q8WU39 189 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 SLC35A4Q96G79 324 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 EPB41L4BQ9H329 900 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 ANKRA2Q9H9E1 313 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 SIRT5Q9NXA8 310 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 ZNF629Q9UEG4 869 aaPredicted RBP16.34■□□□□ 0.21
PNKP-225ENST00000636214 FOXD3Q9UJU5 478 aaPredicted RBP16.34■□□□□ 0.21
PNKP-225ENST00000636214 EMCNQ9ULC0 261 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 WBP11Q9Y2W2 641 aaKnown RBP16.34■□□□□ 0.21
PNKP-225ENST00000636214 POLR3HQ9Y535 204 aaPredicted RBP16.34■□□□□ 0.21
PNKP-225ENST00000636214 WIF1Q9Y5W5 379 aa16.34■□□□□ 0.21
PNKP-225ENST00000636214 DOCK7Q96N67 2140 aa16.33■□□□□ 0.21
PNKP-225ENST00000636214 G3V2L1 256 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 PLIN3O60664 434 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 RSL1D1O76021 490 aaKnown RBP16.33■□□□□ 0.2
PNKP-225ENST00000636214 PROCP04070 461 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 JUNP05412 331 aaKnown RBP16.33■□□□□ 0.2
PNKP-225ENST00000636214 CPA3P15088 417 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 CRHR1P34998 444 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 OPRM1P35372 400 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 FOXA1P55317 472 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 CORO7P57737 925 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 DNAJB13P59910 316 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 SRYQ05066 204 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 SH2D4BQ5SQS7 431 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 DESI1Q6ICB0 168 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 AAGABQ6PD74 315 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 SEM1Q6ZVN7 128 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 PLCZ1Q86YW0 608 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 ZZZ3Q8IYH5 903 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 OR7G2Q8NG99 324 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 OR4K17Q8NGC6 315 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 WDYHV1Q96HA8 205 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 VSTM2LQ96N03 204 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 OR2B2Q9GZK3 357 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 CALHM2Q9HA72 323 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 MYNNQ9NPC7 610 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 DDX18Q9NVP1 670 aaKnown RBP16.33■□□□□ 0.2
PNKP-225ENST00000636214 TAS2R10Q9NYW0 307 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 MRTO4Q9UKD2 239 aaKnown RBP16.33■□□□□ 0.2
PNKP-225ENST00000636214 L3MBTL1Q9Y468 752 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 CELSR1Q9NYQ6 3014 aa16.33■□□□□ 0.2
PNKP-225ENST00000636214 CD8B2A6NJW9 211 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 EEF1E1-BLOC1S5C9J1V9 151 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 EEF1E1O43324 174 aaKnown RBP16.32■□□□□ 0.2
PNKP-225ENST00000636214 MPDZO75970 2070 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 CHEK2O96017 543 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 UROSP10746 265 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 CTSSP25774 331 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 SRD5A2P31213 254 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 SOX18P35713 384 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 PTGDSP41222 190 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 DGKQP52824 942 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 PNLIPRP2P54317 469 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 WNT3P56703 355 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 CEBPEQ15744 281 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 LIPMQ5VYY2 423 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 IKBIPQ70UQ0 350 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 KIF18BQ86Y91 864 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 TDRPQ86YL5 185 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 HOMEZQ8IX15 550 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 WDSUB1Q8N9V3 476 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 RELL2Q8NC24 303 aaPredicted RBP16.32■□□□□ 0.2
PNKP-225ENST00000636214 NAXEQ8NCW5 288 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 ZPLD1Q8TCW7 415 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 RNASE6Q93091 150 aaKnown RBP16.32■□□□□ 0.2
PNKP-225ENST00000636214 EFHD2Q96C19 240 aaPredicted RBP16.32■□□□□ 0.2
PNKP-225ENST00000636214 SFXN2Q96NB2 322 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 OXSMQ9NWU1 459 aa16.32■□□□□ 0.2
PNKP-225ENST00000636214 DNAJB12Q9NXW2 375 aaKnown RBP16.32■□□□□ 0.2
PNKP-225ENST00000636214 AKAP9Q99996 3911 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 MYO1GB0I1T2 1018 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 SYT5O00445 386 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 UBFD1O14562 309 aaKnown RBP16.31■□□□□ 0.2
PNKP-225ENST00000636214 RGS14O43566 566 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 SEC22BO75396 215 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 SHBGP04278 402 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 CT45A8P0DMV1 189 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 CT45A9P0DMV2 189 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms