RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 RAB42Q8N4Z0 105 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 C12orf76Q8N812 135 aaPredicted RBP10.58□□□□□ -0.72
VARS2-213ENST00000625423 ZNF513Q8N8E2 541 aaPredicted RBP10.58□□□□□ -0.72
VARS2-213ENST00000625423 ACOT4Q8N9L9 421 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 GNPDA2Q8TDQ7 276 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 UFD1Q92890 307 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 MS4A6EQ96DS6 147 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 SLC22A4Q9H015 551 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 SEMA4GQ9NTN9 838 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 MRPS18AQ9NVS2 196 aaKnown RBP10.58□□□□□ -0.72
VARS2-213ENST00000625423 ZNF232Q9UNY5 417 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 ASB4Q9Y574 426 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 GON4LQ3T8J9 2241 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 KNL1Q8NG31 2342 aa10.58□□□□□ -0.72
VARS2-213ENST00000625423 RGS13O14921 159 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 CASC3O15234 703 aaKnown RBP10.57□□□□□ -0.72
VARS2-213ENST00000625423 UBXN7O94888 489 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 NFATC1O95644 943 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 AIFM1O95831 613 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 CSF2P04141 144 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 LIMS3P0CW19 117 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 LIMS4P0CW20 117 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 HIST1H1TP22492 207 aaPredicted RBP10.57□□□□□ -0.72
VARS2-213ENST00000625423 S100A1P23297 94 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 SOX18P35713 384 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 TPBGQ13641 420 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 NDUFA5Q16718 116 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 BHLHB9Q6PI77 547 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 TMEM64Q6YI46 380 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 HSDL2Q6YN16 418 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 ZNF730Q6ZMV8 503 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 CRISPLD2Q9H0B8 497 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 SNX7Q9UNH6 387 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 OR52A4PA6NMU1 304 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 SNTNA6NMZ2 147 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 CERS1P27544 350 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 DRD3P35462 400 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 ANXA11P50995 505 aaKnown RBP10.57□□□□□ -0.72
VARS2-213ENST00000625423 RAB28P51157 221 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 ASAH1Q13510 395 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 CAMK1Q14012 370 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 GNA13Q14344 377 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 ZIC1Q15915 447 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 MINDY4Q4G0A6 757 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 TMEM35AQ53FP2 167 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 QSOX2Q6ZRP7 698 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 BADQ92934 168 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 SLC38A2Q96QD8 506 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 OR7D2Q96RA2 312 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 SLC38A1Q9H2H9 487 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 MRPS30Q9NP92 439 aaKnown RBP10.57□□□□□ -0.72
VARS2-213ENST00000625423 PRDM7Q9NQW5 492 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 WDR70Q9NW82 654 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 COMMD3Q9UBI1 195 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 ACSL5Q9ULC5 683 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 ENTPD4Q9Y227 616 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 NTNG1Q9Y2I2 539 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 PLEKHM1Q9Y4G2 1056 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 DNMT3AQ9Y6K1 912 aaPredicted RBP10.57□□□□□ -0.72
VARS2-213ENST00000625423 HEATR5BQ9P2D3 2071 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 NUMA1Q14980 2115 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 CCDC182A6NF36 153 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 LALBAP00709 142 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 ATP5A1P25705 553 aaKnown RBP10.57□□□□□ -0.72
VARS2-213ENST00000625423 TRHRP34981 398 aaPredicted RBP10.57□□□□□ -0.72
VARS2-213ENST00000625423 DDOSTP39656 456 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 MC3RP41968 323 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 AVPR1BP47901 424 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 RAB8AP61006 207 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 MRPS15P82914 257 aaKnown RBP10.57□□□□□ -0.72
VARS2-213ENST00000625423 TSPAN31Q12999 210 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 KRT33BQ14525 404 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 FAM78AQ5JUQ0 283 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 SLC30A6Q6NXT4 461 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 ABHD17CQ6PCB6 329 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 RRM2BQ7LG56 351 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 GDPD1Q8N9F7 314 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 TTLQ8NG68 377 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 SFXN5Q8TD22 340 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 RAB7BQ96AH8 199 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 DCLRE1CQ96SD1 692 aaKnown RBP10.57□□□□□ -0.72
VARS2-213ENST00000625423 WDR26Q9H7D7 661 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 SLC13A4Q9UKG4 626 aa10.57□□□□□ -0.72
VARS2-213ENST00000625423 EXOSC1Q9Y3B2 195 aaKnown RBP10.57□□□□□ -0.72
VARS2-213ENST00000625423 CENPXA8MT69 81 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 POLR1CO15160 346 aaPredicted RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 MID1O15344 667 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 PAK4O96013 591 aaPredicted RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 GNSP15586 552 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 EN2P19622 333 aaPredicted RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 GABRA5P31644 462 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 WASP42768 502 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 CDH11P55287 796 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 TRAM2Q15035 370 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 MRGPREQ86SM8 312 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 NKAIN4Q8IVV8 208 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 C7orf61Q8IZ16 206 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 ATP6V1C2Q8NEY4 427 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 NUP43Q8NFH3 380 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 OR4F15Q8NGB8 312 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms