RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 PTPRCAPQ14761 206 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 IRF4Q15306 451 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ALG10Q5BKT4 473 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 FAM72AQ5TYM5 149 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 FAM72DQ6L9T8 149 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 CXCL17Q6UXB2 119 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 GPR142Q7Z601 462 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 COMTD1Q86VU5 262 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 FAM72BQ86X60 149 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 NUS1Q96E22 293 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 UHRF1Q96T88 793 aaPredicted RBP8.47□□□□□ -1.05
VCL-206ENST00000623461 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 BRF2Q9HAW0 419 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 HYKKA2RU49 373 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 MEGF11A6BM72 1044 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 AMY2BP19961 511 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 DGKZQ13574 1117 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ZNF169Q14929 603 aaPredicted RBP8.47□□□□□ -1.05
VCL-206ENST00000623461 FAM214AQ32MH5 1076 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 CLDN19Q8N6F1 224 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SOWAHBA6NEL2 793 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 NUDT19A8MXV4 375 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ANHXE9PGG2 379 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 MT-ND4P03905 459 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 DRD2P14416 443 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 NDUFS1P28331 727 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 MAP2K5Q13163 448 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 TCTE1Q5JU00 501 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 CAMKVQ8NCB2 501 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 HRASLS5Q96KN8 279 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ZNF778Q96MU6 729 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 NEURL2Q9BR09 285 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ACTL8Q9H568 366 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 HRH3Q9Y5N1 445 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 CITO14578 2027 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 P2RX6O15547 441 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 HOXC11O43248 304 aaPredicted RBP8.47□□□□□ -1.05
VCL-206ENST00000623461 CD9P21926 228 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 HOXC8P31273 242 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 LRRC32Q14392 662 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 LETMD1Q6P1Q0 360 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 OSTM1Q86WC4 334 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ZNF283Q8N7M2 679 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 OR2AP1Q8NGE2 309 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 OR10K1Q8NGX5 313 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ST8SIA4Q92187 359 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 CLMPQ9H6B4 373 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 APMAPQ9HDC9 416 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 Q9N2J8 555 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SMCO4Q9NRQ5 59 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 COPS7AQ9UBW8 275 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 TAC3Q9UHF0 121 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 CBY1Q9Y3M2 126 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 EOMESO95936 686 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 PFKLP17858 780 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 S100A11P31949 105 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 RPS24P62847 133 aaKnown RBP8.47□□□□□ -1.05
VCL-206ENST00000623461 GFOD2Q3B7J2 385 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 FRMPD2BQ6IN97 320 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ZNF425Q6IV72 752 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 MAVSQ7Z434 540 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 DEFB128Q7Z7B8 93 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 CLEC14AQ86T13 490 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 CLECL1Q8IZS7 167 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 PMM1Q92871 262 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 PRRT1Q99946 306 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 PRRG4Q9BZD6 226 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 NELFAQ9H3P2 528 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 AKIP1Q9NQ31 210 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SDHAF2Q9NX18 166 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SCDO00767 359 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 GPR37L1O60883 481 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 GBAP04062 536 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 S100A8P05109 93 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ADRB3P13945 408 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 DAPP51397 102 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 RACK1P63244 317 aaKnown RBP8.47□□□□□ -1.05
VCL-206ENST00000623461 PTPRRQ15256 657 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ALKAL2Q6UX46 152 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SUMF2Q8NBJ7 301 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 TMEM163Q8TC26 289 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SUSD3Q96L08 255 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SRMSQ9H3Y6 488 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SAGE1Q9NXZ1 904 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 NDUFS4O43181 175 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 ALDOCP09972 364 aaKnown RBP8.46□□□□□ -1.05
VCL-206ENST00000623461 MAGEA11P43364 429 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 HTR6P50406 440 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 FOXA1P55317 472 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 ERVFC1P60507 584 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 FCN2Q15485 313 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 STK11Q15831 433 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 TAZQ16635 292 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 PLBD1Q6P4A8 553 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 PAPD4Q6PIY7 484 aaKnown RBP8.46□□□□□ -1.05
VCL-206ENST00000623461 LYPD4Q6UWN0 246 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 RANBP10Q6VN20 620 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 NAGSQ8N159 534 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 ECHDC3Q96DC8 303 aa8.46□□□□□ -1.05
VCL-206ENST00000623461 POLDIP3Q9BY77 421 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms