RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 TMEM107Q6UX40 140 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 SH2D5Q6ZV89 423 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 IFNEQ86WN2 208 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 FAM83FQ8NEG4 500 aaPredicted RBP11.94□□□□□ -0.5
ATRX-208ENST00000622960 HGDQ93099 445 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 ABTB1Q969K4 478 aaPredicted RBP11.94□□□□□ -0.5
ATRX-208ENST00000622960 C11orf24Q96F05 449 aaPredicted RBP11.94□□□□□ -0.5
ATRX-208ENST00000622960 SLC35A4Q96G79 324 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 LURAP1Q96LR2 239 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 NODALQ96S42 347 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 CCT7Q99832 543 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 ZNF559Q9BR84 538 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 UCK2Q9BZX2 261 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 ROPN1BQ9BZX4 212 aaPredicted RBP11.94□□□□□ -0.5
ATRX-208ENST00000622960 UBQLN3Q9H347 655 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 ANKZF1Q9H8Y5 726 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 ROPN1Q9HAT0 212 aaPredicted RBP11.94□□□□□ -0.5
ATRX-208ENST00000622960 GALNT9Q9HCQ5 603 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 Q9N2J8 555 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 SDHAF3Q9NRP4 125 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 Q9UFV3 132 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 TMED5Q9Y3A6 229 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 WIF1Q9Y5W5 379 aa11.94□□□□□ -0.5
ATRX-208ENST00000622960 PHF3Q92576 2039 aaKnown RBP11.94□□□□□ -0.5
ATRX-208ENST00000622960 CACNA1CQ13936 2221 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 ZNF407Q9C0G0 2248 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 TTC36A6NLP5 189 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 MYO1GB0I1T2 1018 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 TMEM114B3SHH9 223 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 H0Y3Z8 333 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 NPHS1O60500 1241 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 TOXO94900 526 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 SLU7O95391 586 aaKnown RBP11.93□□□□□ -0.5
ATRX-208ENST00000622960 CYP4B1P13584 511 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 PRPH2P23942 346 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 MC3RP41968 323 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 CORO7P57737 925 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 VSNL1P62760 191 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 RPL38P63173 70 aaKnown RBP11.93□□□□□ -0.5
ATRX-208ENST00000622960 VPS26BQ4G0F5 336 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 ACSF3Q4G176 576 aaPredicted RBP11.93□□□□□ -0.5
ATRX-208ENST00000622960 EIPR1Q53HC9 387 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 WIPI1Q5MNZ9 446 aaPredicted RBP11.93□□□□□ -0.5
ATRX-208ENST00000622960 FAM219BQ5XKK7 198 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 RTL6Q6ICC9 239 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 FAM71E1Q6IPT2 247 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 SZRD1Q7Z422 152 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 TMEM200AQ86VY9 491 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 PLCZ1Q86YW0 608 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 OR7G2Q8NG99 324 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 OR4K17Q8NGC6 315 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 OR2W6PQ8NHA6 318 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 PPP1R14CQ8TAE6 165 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 PPCDCQ96CD2 204 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 VSTM2LQ96N03 204 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 FAM111AQ96PZ2 611 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 TRIB1Q96RU8 372 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 TIMP4Q99727 224 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 PRDM14Q9GZV8 571 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 MCCC2Q9HCC0 563 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 HHATLQ9HCP6 504 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 SERHLQ9NQF3 203 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 TAS2R7Q9NYW3 318 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 PPP4R1LQ9P1A2 415 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 KCNN3Q9UGI6 736 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 EXO1Q9UQ84 846 aaKnown RBP11.93□□□□□ -0.5
ATRX-208ENST00000622960 SLC6A5Q9Y345 797 aa11.93□□□□□ -0.5
ATRX-208ENST00000622960 ZWINTO95229 277 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 KCNH1O95259 989 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 EPPINO95925 133 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 CT45A8P0DMV1 189 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 CT45A9P0DMV2 189 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 BMP7P18075 431 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 BMP5P22003 454 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 SERPINB5P36952 375 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 HPCAL1P37235 193 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 RPL3P39023 403 aaKnown RBP11.92□□□□□ -0.5
ATRX-208ENST00000622960 ASMTP46597 345 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 HSPB3Q12988 150 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 GALNTL6Q49A17 601 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 CYP27C1Q4G0S4 372 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 CT45A2Q5DJT8 189 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 NHSL2Q5HYW2 709 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 FNDC7Q5VTL7 733 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 VASNQ6EMK4 673 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 RNF165Q6ZSG1 346 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 CHMP1BQ7LBR1 199 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 R3HCC1LQ7Z5L2 792 aaKnown RBP11.92□□□□□ -0.5
ATRX-208ENST00000622960 YRDCQ86U90 279 aaKnown RBP11.92□□□□□ -0.5
ATRX-208ENST00000622960 TRABD2AQ86V40 505 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 BANPQ8N9N5 519 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 SIMC1Q8NDZ2 872 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 EFHD2Q96C19 240 aaPredicted RBP11.92□□□□□ -0.5
ATRX-208ENST00000622960 ZBED6CLQ96FA7 236 aaPredicted RBP11.92□□□□□ -0.5
ATRX-208ENST00000622960 AMDHD1Q96NU7 426 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 GATA5Q9BWX5 397 aaPredicted RBP11.92□□□□□ -0.5
ATRX-208ENST00000622960 UGT2B28Q9BY64 529 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 C12orf65Q9H3J6 166 aaKnown RBP11.92□□□□□ -0.5
ATRX-208ENST00000622960 ACBD3Q9H3P7 528 aa11.92□□□□□ -0.5
ATRX-208ENST00000622960 ANKRA2Q9H9E1 313 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms