RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 WASH3PC4AMC7 463 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 G3V3Q6 166 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 ENTPD6O75354 484 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 NCR1O76036 304 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 S1PR4O95977 384 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 PFKMP08237 780 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 DRD2P14416 443 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 RGS4P49798 205 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 RAB8AP61006 207 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 HTR4Q13639 388 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 KRT33BQ14525 404 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 FAM122BQ7Z309 247 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 LGI4Q8N135 537 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 SPPL2AQ8TCT8 520 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 GTPBP3Q969Y2 492 aaKnown RBP7.49□□□□□ -1.21
VPS11-209ENST00000622309 CDK15Q96Q40 435 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 DMRTA2Q96SC8 542 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 ATOH8Q96SQ7 321 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 ADAT1Q9BUB4 502 aaKnown RBP7.49□□□□□ -1.21
VPS11-209ENST00000622309 SLC25A32Q9H2D1 315 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 IMP3Q9NV31 184 aaKnown RBP7.49□□□□□ -1.21
VPS11-209ENST00000622309 CA5BQ9Y2D0 317 aa7.49□□□□□ -1.21
VPS11-209ENST00000622309 YARS2Q9Y2Z4 477 aaKnown RBP7.49□□□□□ -1.21
VPS11-209ENST00000622309 RFXAPO00287 272 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 PRRG1O14668 218 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 SUSD5O60279 629 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 EDN1P05305 212 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 HOXC6P09630 235 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 UGT2B7P16662 529 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 DRD5P21918 477 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 AGTR2P50052 363 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 CCR6P51684 374 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 RPS25P62851 125 aaKnown RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 PTGES3Q15185 160 aaKnown RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 PLK5Q496M5 336 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 SYTL3Q4VX76 610 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 SLC39A12Q504Y0 691 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 XKR3Q5GH77 459 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 ZPBP2Q6X784 338 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 OR56B4Q8NH76 319 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 TRAPPC12Q8WVT3 735 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 GATAD2BQ8WXI9 593 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 ESAMQ96AP7 390 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 HHIPQ96QV1 700 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 NIPSNAP1Q9BPW8 284 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 AGO3Q9H9G7 860 aaKnown RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 KLHL1Q9NR64 748 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 TREX1Q9NSU2 369 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 RLIMQ9NVW2 624 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 DNAJC27Q9NZQ0 273 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 DHCR7Q9UBM7 475 aaKnown RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 FXYD6-FXYD2A0A087WZ82 144 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 SLC28A2O43868 658 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 DOK2O60496 412 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 FZD7O75084 574 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 PRAMEF12O95522 483 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 HPXP02790 462 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 COX5BP10606 129 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 ELK1P19419 428 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 CNR2P34972 360 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 BTCP35070 178 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 CDKN2CP42773 168 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 SLC1A3P43003 542 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 CHRNA4P43681 627 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 RAP2BP61225 183 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 SEC61A1P61619 476 aaKnown RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 SPIBQ01892 262 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 POU4F2Q12837 409 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 KIAA0040Q15053 153 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 GUCA2BQ16661 112 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 SOWAHAQ2M3V2 549 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 CDNFQ49AH0 187 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 RNASE12Q5GAN4 147 aaKnown RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 ATAT1Q5SQI0 421 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 PAQR6Q6TCH4 344 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 ABHD15Q6UXT9 468 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 ANKRD46Q86W74 232 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 CCDC117Q8IWD4 279 aaPredicted RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 ZNF687Q8N1G0 1237 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 SLC43A2Q8N370 569 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 MEIOBQ8N635 442 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 TTC16Q8NEE8 873 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 OR10H5Q8NGA6 315 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 OR56B2PQ8NGI1 322 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 RHOVQ96L33 236 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 MAPKAP1Q9BPZ7 522 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 DUSP16Q9BY84 665 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 FXYD6Q9H0Q3 95 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 KLHL31Q9H511 634 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 SLC6A13Q9NSD5 602 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 RPS6KB2Q9UBS0 482 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 ACSL6Q9UKU0 697 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 RPL36Q9Y3U8 105 aaKnown RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 SNX11Q9Y5W9 270 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 AGAP14A8MT82 685 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 SEMA7AO75326 666 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 ECI2O75521 394 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 KRT33AO76009 404 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 NR2F6P10588 404 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 CLUP10909 449 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms