RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 TFPTP0C1Z6 253 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 CCNYL3P0C7X3 344 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 NR0B1P51843 470 aaKnown RBP9.82□□□□□ -0.84
VPS11-208ENST00000621676 CRISP3P54108 245 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 FUT5Q11128 374 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 CTU2Q2VPK5 515 aaKnown RBP9.82□□□□□ -0.84
VPS11-208ENST00000621676 TMEM35AQ53FP2 167 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 BICRALQ6AI39 1079 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 LCN10Q6JVE6 187 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 PWWP2BQ6NUJ5 590 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 KIAA1958Q8N8K9 716 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 ZNF540Q8NDQ6 660 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 OR52P1PQ8NH57 321 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 SLC7A13Q8TCU3 470 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 ASB12Q8WXK4 309 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 TFAP2CQ92754 450 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 FAM46AQ96IP4 442 aaKnown RBP9.82□□□□□ -0.84
VPS11-208ENST00000621676 DGAT2Q96PD7 388 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 EGLN3Q9H6Z9 239 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 TMEM185BQ9H7F4 350 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 NEUROD4Q9HD90 331 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 MYRFQ9Y2G1 1151 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 GUCY1B2O75343 617 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 GPR75O95800 540 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 PRPH2P23942 346 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 PDE7AQ13946 482 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 SHBQ15464 509 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 TCTN3Q6NUS6 607 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 HSDL2Q6YN16 418 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 ZCCHC7Q8N3Z6 543 aaKnown RBP9.82□□□□□ -0.84
VPS11-208ENST00000621676 CAMKK1Q8N5S9 505 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 ZFP28Q8NHY6 868 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 GIPC3Q8TF64 312 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 STARD8Q92502 1023 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 ZNF556Q9HAH1 456 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 PCOLCE2Q9UKZ9 415 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 SLC22A7Q9Y694 548 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 AKAP6Q13023 2319 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 hCG_2014768A0A024R1R8 64 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 TMEM229AB2RXF0 380 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 SHISA8B8ZZ34 492 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 CLDN4O14493 209 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 CASQ2O14958 399 aaPredicted RBP9.82□□□□□ -0.84
VPS11-208ENST00000621676 EMC8O43402 210 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 SEMA3DO95025 777 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 RASAL1O95294 804 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 FHP07954 510 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 CELA2AP08217 269 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 UMPSP11172 480 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 PSMB9P28065 219 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 FAM53BQ14153 422 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 MAPK11Q15759 364 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 FLYWCH1Q4VC44 716 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 PLEKHM3Q6ZWE6 761 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 RNF44Q7L0R7 432 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 MAML2Q8IZL2 1156 aaPredicted RBP9.82□□□□□ -0.84
VPS11-208ENST00000621676 SENP5Q96HI0 755 aaPredicted RBP9.82□□□□□ -0.84
VPS11-208ENST00000621676 CNDP2Q96KP4 475 aaKnown RBP9.82□□□□□ -0.84
VPS11-208ENST00000621676 ZNF300Q96RE9 604 aaPredicted RBP9.82□□□□□ -0.84
VPS11-208ENST00000621676 SERINC2Q96SA4 455 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 OSBPL11Q9BXB4 747 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 ASIC5Q9NY37 505 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 IFT80Q9P2H3 777 aaPredicted RBP9.82□□□□□ -0.84
VPS11-208ENST00000621676 TMCC3Q9ULS5 477 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 ZC3H12DA2A288 527 aaKnown RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 TMEM221A6NGB7 291 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 M0R296 226 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 NPPAP01160 153 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 GYPBP06028 91 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 GIMD1P0DJR0 217 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 CKMT1AP12532 417 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ZNF10P21506 573 aaPredicted RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 CAPGP40121 348 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ALDH3A2P51648 485 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 INPP5JQ15735 1006 aaPredicted RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 INAVAQ3KP66 663 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 INTS11Q5TA45 600 aaKnown RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 ZNF730Q6ZMV8 503 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 KRT73Q86Y46 540 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 C8orf59Q8N0T1 100 aaPredicted RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 CYB561A3Q8NBI2 242 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 CNOT9Q92600 299 aaKnown RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 NEURL3Q96EH8 262 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 C7orf34Q96L11 122 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ZNF597Q96LX8 424 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ZNF681Q96N22 645 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ZNF607Q96SK3 696 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 MCHR1Q99705 422 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ITPAQ9BY32 194 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 CES1P1Q9UKY3 287 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 COMMD3-BMI1R4GMX3 469 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ZNF407Q9C0G0 2248 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 PRR19A6NJB7 356 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 SERPINB7O75635 380 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 UGT2B17O75795 530 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 MFN2O95140 757 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ARAFP10398 606 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ACP2P11117 423 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 FCGR1AP12314 374 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 EFNA3P52797 238 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms