RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PPM1BO75688 479 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 RASAL1O95294 804 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 HMGN2P05204 90 aaKnown RBP17.11■□□□□ 0.33
CIRBP-245ENST00000621399 UQCRC2P22695 453 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 GABRA3P34903 492 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 FBXW4P57775 412 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 GAB1Q13480 694 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 LASP1Q14847 261 aaKnown RBP17.11■□□□□ 0.33
CIRBP-245ENST00000621399 NTRK2Q16620 822 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 ZCCHC12Q6PEW1 402 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 BLOC1S3Q6QNY0 202 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 CPLX4Q7Z7G2 160 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 FUNDC1Q8IVP5 155 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 CLEC4FQ8N1N0 589 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 CISD2Q8N5K1 135 aaKnown RBP17.11■□□□□ 0.33
CIRBP-245ENST00000621399 PSD4Q8NDX1 1056 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 OR10G3Q8NGC4 313 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 OR4N2Q8NGD1 307 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 FBXO30Q8TB52 745 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 GPR151Q8TDV0 419 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 JADE3Q92613 823 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 TMBIM1Q969X1 311 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 INPP5KQ9BT40 448 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 NSRP1Q9H0G5 558 aaKnown RBP17.11■□□□□ 0.33
CIRBP-245ENST00000621399 ZNF385DQ9H6B1 395 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 MAP10Q9P2G4 905 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 FAF1Q9UNN5 650 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-245ENST00000621399 KLF13Q9Y2Y9 288 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-245ENST00000621399 KLRC4-KLRK1H3BQV0 150 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 NR5A2O00482 541 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 RFXANKO14593 260 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 P04436 131 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 ALOX5P09917 674 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 MLLT10P55197 1068 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 RCAN2Q14206 197 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 INPP5JQ15735 1006 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-245ENST00000621399 INAQ16352 499 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 CYP27C1Q4G0S4 372 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 SLC22A10Q63ZE4 541 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 ZNF621Q6ZSS3 439 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 MSANTD1Q6ZTZ1 278 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 NUP54Q7Z3B4 507 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 C6orf120Q7Z4R8 191 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 SPATA21Q7Z572 469 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 CPSF7Q8N684 471 aaKnown RBP17.1■□□□□ 0.33
CIRBP-245ENST00000621399 TRIML2Q8N7C3 387 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 FAM98AQ8NCA5 519 aaKnown RBP17.1■□□□□ 0.33
CIRBP-245ENST00000621399 SLC16A11Q8NCK7 471 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 GOT1L1Q8NHS2 421 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-245ENST00000621399 C10orf82Q8WW14 230 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 ITCHQ96J02 903 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 ELAC2Q9BQ52 826 aaKnown RBP17.1■□□□□ 0.33
CIRBP-245ENST00000621399 EPN3Q9H201 632 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 SACM1LQ9NTJ5 587 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 GPATCH2Q9NW75 528 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 CBLCQ9ULV8 474 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 VPS4AQ9UN37 437 aa17.1■□□□□ 0.33
CIRBP-245ENST00000621399 G3V3Y1 287 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 PEX1O43933 1283 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 NKX2-2O95096 273 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 GSNP06396 782 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 KRT16P08779 473 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 CCL3P10147 92 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 ACP2P11117 423 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 DRD4P21917 467 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 IL12BP29460 328 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 CHI3L1P36222 383 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-245ENST00000621399 MAP3K8P41279 467 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 CDKN2CP42773 168 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 GPR85P60893 370 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 RPP38P78345 283 aaKnown RBP17.09■□□□□ 0.33
CIRBP-245ENST00000621399 PRR30Q53SZ7 412 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-245ENST00000621399 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-245ENST00000621399 SULF2Q8IWU5 870 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 PAQR8Q8TEZ7 354 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 PIK3R3Q92569 461 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 DIO2Q92813 273 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 HOXB13Q92826 284 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-245ENST00000621399 SNRNP40Q96DI7 357 aaKnown RBP17.09■□□□□ 0.33
CIRBP-245ENST00000621399 SPDL1Q96EA4 605 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 OTUB1Q96FW1 271 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-245ENST00000621399 COL21A1Q96P44 957 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 ADOQ96SZ5 270 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 SLC35A5Q9BS91 424 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 ACTRT3Q9BYD9 372 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 SH2D2AQ9NP31 389 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 SERHLQ9NQF3 203 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 CNIH4Q9P003 139 aa17.09■□□□□ 0.33
CIRBP-245ENST00000621399 MRTO4Q9UKD2 239 aaKnown RBP17.09■□□□□ 0.33
CIRBP-245ENST00000621399 CHCHD2Q9Y6H1 151 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-245ENST00000621399 GXYLT2A0PJZ3 443 aa17.08■□□□□ 0.32
CIRBP-245ENST00000621399 OR6C70A6NIJ9 312 aa17.08■□□□□ 0.32
CIRBP-245ENST00000621399 SLC28A2O43868 658 aa17.08■□□□□ 0.32
CIRBP-245ENST00000621399 KCNH1O95259 989 aa17.08■□□□□ 0.32
CIRBP-245ENST00000621399 ANP32DO95626 131 aa17.08■□□□□ 0.32
CIRBP-245ENST00000621399 CNR1P21554 472 aa17.08■□□□□ 0.32
CIRBP-245ENST00000621399 DUSP5Q16690 384 aa17.08■□□□□ 0.32
CIRBP-245ENST00000621399 DECR1Q16698 335 aa17.08■□□□□ 0.32
CIRBP-245ENST00000621399 C6orf10Q5SRN2 563 aa17.08■□□□□ 0.32
CIRBP-245ENST00000621399 CDC73Q6P1J9 531 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms