RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ATP5A1P25705 553 aaKnown RBP7.16□□□□□ -1.26
CLK1-215ENST00000621181 CTSSP25774 331 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 PCSK6P29122 969 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 CRABP2P29373 138 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 PRDX6P30041 224 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 STT3AP46977 705 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 MASP1P48740 699 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 SERPINB8P50452 374 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 CCNIQ14094 377 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 HIST2H2ACQ16777 129 aaPredicted RBP7.16□□□□□ -1.26
CLK1-215ENST00000621181 AP5B1Q2VPB7 878 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 CCDC153Q494R4 210 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 PAGE2BQ5JRK9 111 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 TBCELQ5QJ74 424 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 HIST2H2AA3Q6FI13 130 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 AAGABQ6PD74 315 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 POMZP3Q6PJE2 187 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 LYPD8Q6UX82 237 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 CMC1Q7Z7K0 106 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 PRIMA1Q86XR5 153 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 WDR75Q8IWA0 830 aaKnown RBP7.16□□□□□ -1.26
CLK1-215ENST00000621181 ACTRT2Q8TDY3 377 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 PPWD1Q96BP3 646 aaKnown RBP7.16□□□□□ -1.26
CLK1-215ENST00000621181 SPDL1Q96EA4 605 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 FBXL20Q96IG2 436 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 ZNF184Q99676 751 aaPredicted RBP7.16□□□□□ -1.26
CLK1-215ENST00000621181 TBCDQ9BTW9 1192 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 EFCAB11Q9BUY7 163 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 ZNF385DQ9H6B1 395 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 PROK2Q9HC23 129 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 ZNF490Q9ULM2 529 aaPredicted RBP7.16□□□□□ -1.26
CLK1-215ENST00000621181 ZANQ9Y493 2812 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 FAM95CA0A1B0GW59 222 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 KIAA1324LA8MWY0 1029 aaPredicted RBP7.15□□□□□ -1.26
CLK1-215ENST00000621181 TMEM114B3SHH9 223 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 HRKO00198 91 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 SAP18O00422 153 aaKnown RBP7.15□□□□□ -1.26
CLK1-215ENST00000621181 TP53I11O14683 189 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 CASKO14936 926 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 OR10H2O60403 315 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 ERN1O75460 977 aaKnown RBP7.15□□□□□ -1.26
CLK1-215ENST00000621181 LY6G6DO95868 133 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 HRGP04196 525 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 TYK2P29597 1187 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 SPRP35270 261 aaPredicted RBP7.15□□□□□ -1.26
CLK1-215ENST00000621181 HSPA7P48741 367 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 SESN3P58005 492 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 HERVK_113P63132 956 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 ERVK-8P63133 956 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 SLC25A3Q00325 362 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 DOC2AQ14183 400 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 RCAN2Q14206 197 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 RPS6KA2Q15349 733 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 NTRK2Q16620 822 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 TMEM35AQ53FP2 167 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 Q5PR19 223 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 LUZP2Q86TE4 346 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 ZC3HC1Q86WB0 502 aaKnown RBP7.15□□□□□ -1.26
CLK1-215ENST00000621181 KRTAP1-3Q8IUG1 177 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 TAGAPQ8N103 731 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 TCAIMQ8N3R3 496 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 DOK4Q8TEW6 326 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 ANKRD49Q8WVL7 239 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 ESAMQ96AP7 390 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 RILPQ96NA2 401 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 DACH2Q96NX9 599 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 GNRHR2Q96P88 292 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 MDFIQ99750 246 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 TMEM79Q9BSE2 394 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 RBM24Q9BX46 236 aaKnown RBP7.15□□□□□ -1.26
CLK1-215ENST00000621181 ERVK-6Q9BXR3 956 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 WWTR1Q9GZV5 400 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 PRDM14Q9GZV8 571 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 RPF2Q9H7B2 306 aaKnown RBP7.15□□□□□ -1.26
CLK1-215ENST00000621181 S100A14Q9HCY8 104 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 MS4A12Q9NXJ0 267 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 ERVK-19Q9WJR5 959 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 EIF3LQ9Y262 564 aaKnown RBP7.15□□□□□ -1.26
CLK1-215ENST00000621181 SLC6A5Q9Y345 797 aa7.15□□□□□ -1.26
CLK1-215ENST00000621181 SH3D21A4FU49 640 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 MBD3L4A6NDZ8 208 aaPredicted RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 MBD3L3A6NE82 208 aaPredicted RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 MBD3L5A6NJ08 208 aaPredicted RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 CD8B2A6NJW9 211 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 PRAMEF4O60810 478 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 SMPD2O60906 423 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 FKBP6O75344 327 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 TRIM3O75382 744 aaPredicted RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 STK16O75716 305 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 SNX4O95219 450 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 TGFB1P01137 390 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 C2P06681 752 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 TMIGD3P0DMS9 266 aaPredicted RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 PCNAP12004 261 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 CD22P20273 847 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 TLX1P31314 330 aaPredicted RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 TMED10P49755 219 aaKnown RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 SLC12A2P55011 1212 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 TAS2R39P59534 338 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 IGLV3-21P80748 117 aaPredicted RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms