RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TMEM175Q9BSA9 504 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 C1QTNF7Q9BXJ2 289 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 TFB2MQ9H5Q4 396 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FAM74A7A6NL05 159 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 EIF4EP06730 217 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 UBBP0CG47 229 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 HLA-EP13747 358 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CHATP28329 748 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 TLX1P31314 330 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 DGCR2P98153 550 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SLC9A3R2Q15599 337 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FAM74A3Q4VXF1 159 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 GPR157Q5UAW9 335 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SLC16A12Q6ZSM3 486 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 OR4D10Q8NGI6 311 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 IL17BQ9UHF5 180 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 NUDT1P36639 197 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ACVRL1P37023 503 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 DGKGP49619 791 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SAMD7Q7Z3H4 446 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 RGP1Q92546 391 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 OSTF1Q92882 214 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SAMD8Q96LT4 415 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 MED31Q9Y3C7 131 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 PCDHA9Q9Y5H5 950 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 HBP1O60381 514 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 STBD1O95210 358 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 PTBP3O95758 552 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ATG9BQ674R7 924 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 NOXRED1Q6NXP6 359 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 DYNC2LI1Q8TCX1 351 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF384Q8TF68 577 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SPHK1Q9NYA1 384 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 KLHL9Q9P2J3 617 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FCF1Q9Y324 198 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SNX11Q9Y5W9 270 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 MYBPHLA2RUH7 354 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 AIPO00170 330 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 C1QBP02746 253 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 TPOP07202 933 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 PCP4P48539 62 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 LHX1P48742 406 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 RPP30P78346 268 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CAP1Q01518 475 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 LTB4RQ15722 352 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 DHRS4L2Q6PKH6 230 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 AKT1S1Q96B36 256 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ADAT1Q9BUB4 502 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 RLIMQ9NVW2 624 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 DISP2A7MBM2 1401 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ANKUB1A6NFN9 424 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 KCNAB3O43448 404 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 KERAO60938 352 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 BMP1P13497 986 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 KIR2DL3P43628 341 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 HCCSP53701 268 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FIP1L1Q6UN15 594 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 RBFAQ8N0V3 343 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 DOHHQ9BU89 302 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 TNFRSF12AQ9NP84 129 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FBXO8Q9NRD0 319 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CENPMQ9NSP4 180 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 LAMP2P13473 410 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SSR2P43308 183 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 MRPL19P49406 292 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 IFITM3Q01628 133 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 MELKQ14680 651 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 STEAP4Q687X5 459 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 HHIPL2Q6UWX4 724 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 TRILQ7L0X0 811 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SERPINA9Q86WD7 417 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 RGL4Q8IZJ4 473 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SYNPRQ8TBG9 265 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 TRIM2Q9C040 744 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 NMNAT1Q9HAN9 279 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SLC6A5Q9Y345 797 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CD163L1Q9NR16 1453 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 LINC00587B1AMM8 73 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SC5DO75845 299 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 C22orf31O95567 290 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CTSOP43234 321 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 RAB28P51157 221 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 PSPHP78330 225 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 TLE1Q04724 770 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SLAMF1Q13291 335 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 TRAM2Q15035 370 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SLC46A3Q7Z3Q1 461 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 KIAA0907Q7Z7F0 614 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF761Q86XN6 746 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ATF6BQ99941 703 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 NLGN3Q9NZ94 848 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 LRFN1Q9P244 771 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF780BQ9Y6R6 833 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SPATA31A6Q5VVP1 1343 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 OR6C76A6NM76 312 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 SULT1C2O00338 296 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 IGF2P01344 180 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 HTR6P50406 440 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 OR10A3P58181 314 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 COTL1Q14019 142 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms