RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 OR6C70A6NIJ9 312 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 TSPAN2O60636 221 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 BMP7P18075 431 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 TACR1P25103 407 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 MC3RP41968 323 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 NCBP2P52298 156 aaKnown RBP eCLIP15.65■□□□□ 0.1
HMGN3-203ENST00000620514 SNTA1Q13424 505 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 KIAA0040Q15053 153 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 TMEM107Q6UX40 140 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 WDR53Q7Z5U6 358 aaPredicted RBP15.65■□□□□ 0.1
HMGN3-203ENST00000620514 SLC44A2Q8IWA5 706 aaPredicted RBP15.65■□□□□ 0.1
HMGN3-203ENST00000620514 DMRTC2Q8IXT2 367 aaPredicted RBP15.65■□□□□ 0.1
HMGN3-203ENST00000620514 WDSUB1Q8N9V3 476 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 NAXEQ8NCW5 288 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 FAM76AQ8TAV0 307 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 SLC35A4Q96G79 324 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 EGLN2Q96KS0 407 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 PRDM14Q9GZV8 571 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 MIEF1Q9NQG6 463 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 CAMK2AQ9UQM7 478 aa15.65■□□□□ 0.1
HMGN3-203ENST00000620514 ARHGAP21Q5T5U3 1957 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 C17orf51A8MQB3 221 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 AHRRA9YTQ3 701 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 AZIN1O14977 448 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 SEC22BO75396 215 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 EPPINO95925 133 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 DLX5P56178 289 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 ZNF155Q12901 538 aaPredicted RBP15.64■□□□□ 0.09
HMGN3-203ENST00000620514 NHSL2Q5HYW2 709 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 LARP4Q71RC2 724 aaKnown RBP eCLIP15.64■□□□□ 0.09
HMGN3-203ENST00000620514 TRABD2AQ86V40 505 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 BANPQ8N9N5 519 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 TNIP2Q8NFZ5 429 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 OR2T11Q8NH01 316 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 MED12Q93074 2177 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 ABTB1Q969K4 478 aaPredicted RBP15.64■□□□□ 0.09
HMGN3-203ENST00000620514 EFHD2Q96C19 240 aaPredicted RBP15.64■□□□□ 0.09
HMGN3-203ENST00000620514 TMCO6Q96DC7 493 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 WDYHV1Q96HA8 205 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 APOPT1Q96IL0 206 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 TUBB1Q9H4B7 451 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 GLIPR2Q9H4G4 154 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 TAS2R9Q9NYW1 312 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 TAS2R7Q9NYW3 318 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 SLC17A7Q9P2U7 560 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 MID2Q9UJV3 735 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 POLQO75417 2590 aa15.64■□□□□ 0.09
HMGN3-203ENST00000620514 CSMD2Q7Z408 3487 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 FAM47E-STBD1D6RA91 191 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 TRIM13O60858 407 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 CHRNGP07510 517 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 NUDT17P0C025 328 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 PRPH2P23942 346 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 ALDH3A1P30838 453 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 SLC25A35Q3KQZ1 300 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 ANKRD26P1Q6NSI1 321 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 Q6ZSR9 355 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 GFM2Q969S9 779 aaKnown RBP15.63■□□□□ 0.09
HMGN3-203ENST00000620514 AMDHD1Q96NU7 426 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 FAM111AQ96PZ2 611 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 MECRQ9BV79 373 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 STMN4Q9H169 189 aaPredicted RBP15.63■□□□□ 0.09
HMGN3-203ENST00000620514 LRTM1Q9HBL6 345 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 MCCC2Q9HCC0 563 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 C1orf109Q9NX04 203 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 MKS1Q9NXB0 559 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 FBXL2Q9UKC9 423 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 KIAA1549Q9HCM3 1950 aa15.63■□□□□ 0.09
HMGN3-203ENST00000620514 A0A087WV62 115 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 HSPB2A8KAH6 182 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 TMEM233B4DJY2 109 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 B4DXG7 233 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 NPIPB8E9PQR5 432 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 UPK1AO00322 258 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 SLC28A1O00337 649 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 COQ9O75208 318 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 SPAG7O75391 227 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 CBR3O75828 277 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 LINC00032P0C843 101 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 IL12BP29460 328 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 NTSP30990 170 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 CEACAM8P31997 349 aaPredicted RBP15.62■□□□□ 0.09
HMGN3-203ENST00000620514 KRT20P35900 424 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 PSG6Q00889 435 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 SNTB1Q13884 538 aaKnown RBP15.62■□□□□ 0.09
HMGN3-203ENST00000620514 EFR3AQ14156 821 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 HSPB2Q16082 182 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 SH2D4BQ5SQS7 431 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 KANK2Q63ZY3 851 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 OR5M10Q6IEU7 315 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 IKBIPQ70UQ0 350 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 PLCZ1Q86YW0 608 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 PM20D2Q8IYS1 436 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 RELL2Q8NC24 303 aaPredicted RBP15.62■□□□□ 0.09
HMGN3-203ENST00000620514 OR14L1PQ8NHC6 308 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 RNF138Q8WVD3 245 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 ELP4Q96EB1 424 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 TRIB1Q96RU8 372 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 OR2B2Q9GZK3 357 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 IQCGQ9H095 443 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms