RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	SLC9A3	P48764	834 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	CLCNKA	P51800	687 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	SNRPG	P62308	76 aa	Known RBP	13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	INSL4	Q14641	139 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	MEDAG	Q5VYS4	303 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	PDZD3	Q86UT5	571 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	C12orf40	Q86WS4	652 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	OR52P1P	Q8NH57	321 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	TEX47	Q8TBZ9	253 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	DNAJA4	Q8WW22	397 aa	Predicted RBP	13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	CAPNS2	Q96L46	248 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	FZD3	Q9NPG1	666 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	C12orf4	Q9NQ89	552 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	IMP3	Q9NV31	184 aa	Known RBP	13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	CLCA2	Q9UQC9	943 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	POLH	Q9Y253	713 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	ALPK3	Q96L96	1907 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	LOC102723532	A0A0G2JNH3	316 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644		I3L521	148 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	BTN3A3	O00478	584 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	SLC30A4	O14863	429 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	SLC22A5	O76082	557 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	SOD1	P00441	154 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	P2RY14	Q15391	338 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	IKBIP	Q70UQ0	350 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	NUDT13	Q86X67	352 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	SLC30A8	Q8IWU4	369 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	HYLS1	Q96M11	299 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	ZNF582	Q96NG8	517 aa	Predicted RBP	13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	C1QTNF7	Q9BXJ2	289 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	B3GAT2	Q9NPZ5	323 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	KCND3	Q9UK17	655 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	SNTN	A6NMZ2	147 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	HLA-DQB1	P01920	261 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	SOX18	P35713	384 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	CD79B	P40259	229 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	SMIM11A	P58511	58 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	ZNF628	Q5EBL2	1059 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	NDUFAF5	Q5TEU4	345 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	ZNF730	Q6ZMV8	503 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	SFTPA1	Q8IWL2	248 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	OR8H3	Q8N146	312 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	TMEM145	Q8NBT3	493 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	NXPE3	Q969Y0	559 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	COL26A1	Q96A83	441 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	ARRDC3	Q96B67	414 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	FERD3L	Q96RJ6	166 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	DPH7	Q9BTV6	452 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	B3GNT4	Q9C0J1	378 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	SERHL2	Q9H4I8	314 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	LINC00862	A6NCI5	91 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	NDUFS4	O43181	175 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	ORC5	O43913	435 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	PCDH8	O95206	1070 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	CEL	P19835	753 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	WAS	P42768	502 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	CCR8	P51685	355 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	ERVFC1	P60507	584 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	ABAT	P80404	500 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	DHCR24	Q15392	516 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	C9orf64	Q5T6V5	341 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	CNIH2	Q6PI25	160 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	TIGD4	Q8IY51	512 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	SLC37A3	Q8NCC5	494 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	DOK4	Q8TEW6	326 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	C16orf58	Q96GQ5	468 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	FAM46A	Q96IP4	442 aa	Known RBP	13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	KATNB1	Q9BVA0	655 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	A4GALT	Q9NPC4	353 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	A4GNT	Q9UNA3	340 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	KNL1	Q8NG31	2342 aa		13.62	□□□□□ -0.23
SMTN-223	ENST00000619644	ATG2B	Q96BY7	2078 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	PRAMEF27	A3QJZ7	478 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	LCMT2	O60294	686 aa	Known RBP	13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	PLOD3	O60568	738 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	CTRB1	P17538	263 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	BSG	P35613	385 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	VIPR2	P41587	438 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	CTRB2	Q6GPI1	263 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	ANKRD54	Q6NXT1	300 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	SLC30A6	Q6NXT4	461 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	TMEM107	Q6UX40	140 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	FAM92B	Q6ZTR7	304 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	DCUN1D3	Q8IWE4	304 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	OR4F15	Q8NGB8	312 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	TBX5	Q99593	518 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	MARVELD1	Q9BSK0	173 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	MS4A8	Q9BY19	250 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	ZBP1	Q9H171	429 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	PPIL3	Q9H2H8	161 aa	Known RBP	13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	GLIPR2	Q9H4G4	154 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	GSTK1	Q9Y2Q3	226 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	IRAK3	Q9Y616	596 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	DSPP	Q9NZW4	1301 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	C2orf92	A0A1B0GVN3	265 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	FAM170B	A6NMN3	283 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	TSPAN9	O75954	239 aa		13.61	□□□□□ -0.23
SMTN-223	ENST00000619644	PRNP	P04156	253 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms