RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 CDC14AQ9UNH5 594 aa17.79■□□□□ 0.44
PSPC1-206ENST00000619300 IFT52Q9Y366 437 aa17.79■□□□□ 0.44
PSPC1-206ENST00000619300 WDR45Q9Y484 360 aa17.79■□□□□ 0.44
PSPC1-206ENST00000619300 CHST2Q9Y4C5 530 aa17.79■□□□□ 0.44
PSPC1-206ENST00000619300 PCDHGB1Q9Y5G3 927 aa17.79■□□□□ 0.44
PSPC1-206ENST00000619300 A0A1B0GVT2 93 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 ZBTB11O95625 1053 aaPredicted RBP17.78■□□□□ 0.44
PSPC1-206ENST00000619300 CT62P0C5K7 136 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 DCKP27707 260 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 KRT20P35900 424 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 IDH2P48735 452 aaKnown RBP17.78■□□□□ 0.44
PSPC1-206ENST00000619300 CRISP1P54107 249 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 GARNL3Q5VVW2 1013 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 GPR107Q5VW38 600 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 GTF2IRD2BQ6EKJ0 949 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 TYW3Q6IPR3 259 aaKnown RBP17.78■□□□□ 0.44
PSPC1-206ENST00000619300 PODNL1Q6PEZ8 512 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 GTF2IRD2Q86UP8 949 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 ZNF540Q8NDQ6 660 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 MPP4Q96JB8 637 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 CD180Q99467 661 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 ERVMER34-1Q9H9K5 563 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 HCN3Q9P1Z3 774 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 NINQ8N4C6 2090 aa17.78■□□□□ 0.44
PSPC1-206ENST00000619300 FAM20BO75063 409 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 NSA2O95478 260 aaKnown RBP17.77■□□□□ 0.44
PSPC1-206ENST00000619300 PCMT1P22061 227 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 CHMP24386 653 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 PCSK6P29122 969 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 TCTE1Q5JU00 501 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 PGBD2Q6P3X8 592 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 P3H2Q8IVL5 708 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 SLC25A45Q8N413 288 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 STACQ99469 402 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 IER2Q9BTL4 223 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 LHPPQ9H008 270 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 DUSP22Q9NRW4 184 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 MAN2C1Q9NTJ4 1040 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 IRAK4Q9NWZ3 460 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 KLHL28Q9NXS3 571 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 REV1Q9UBZ9 1251 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 FTSJ1Q9UET6 329 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 ZNF232Q9UNY5 417 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 GPR55Q9Y2T6 319 aaPredicted RBP17.77■□□□□ 0.44
PSPC1-206ENST00000619300 CSNK1G3Q9Y6M4 447 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 SPAG17Q6Q759 2223 aa17.77■□□□□ 0.44
PSPC1-206ENST00000619300 OR10H2O60403 315 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 TPST2O60704 377 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 MRPS14O60783 128 aaKnown RBP17.77■□□□□ 0.43
PSPC1-206ENST00000619300 TRMUO75648 421 aaKnown RBP17.77■□□□□ 0.43
PSPC1-206ENST00000619300 OSMP13725 252 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 FNTBP49356 437 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 MAP4K2Q12851 820 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 BNIP3Q12983 259 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 EXOSC7Q15024 291 aaKnown RBP17.77■□□□□ 0.43
PSPC1-206ENST00000619300 INAVAQ3KP66 663 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 MAMSTRQ6ZN01 415 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 ERI1Q8IV48 349 aaKnown RBP17.77■□□□□ 0.43
PSPC1-206ENST00000619300 PEX5LQ8IYB4 626 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 CLIP4Q8N3C7 705 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 LINC00471Q8N535 108 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 IPCEF1Q8WWN9 437 aaPredicted RBP17.77■□□□□ 0.43
PSPC1-206ENST00000619300 TMEM131Q92545 1883 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 NR4A3Q92570 626 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 PEX11GQ96HA9 241 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 AHCYL2Q96HN2 611 aaKnown RBP17.77■□□□□ 0.43
PSPC1-206ENST00000619300 DGCR6LQ9BY27 220 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 CACYBPQ9HB71 228 aaKnown RBP17.77■□□□□ 0.43
PSPC1-206ENST00000619300 CCNB1IP1Q9NPC3 277 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 ZNF226Q9NYT6 803 aa17.77■□□□□ 0.43
PSPC1-206ENST00000619300 MRPS33Q9Y291 106 aaKnown RBP17.77■□□□□ 0.43
PSPC1-206ENST00000619300 BLACEA4D250 179 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 ZAR1LA6NP61 321 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 NUDT21O43809 227 aaKnown RBP17.76■□□□□ 0.43
PSPC1-206ENST00000619300 CTNSO60931 367 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 ITIH1P19827 911 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 MAP3K8P41279 467 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 UGT2B15P54855 530 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 OR1D5P58170 312 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 EMX1Q04741 257 aaPredicted RBP17.76■□□□□ 0.43
PSPC1-206ENST00000619300 TARDBPQ13148 414 aaKnown RBP eCLIP17.76■□□□□ 0.432e-16■■■■■ 57
PSPC1-206ENST00000619300 SLC13A2Q13183 592 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 ILKQ13418 452 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 DGAT2L6Q6ZPD8 337 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 ZNF595Q8IYB9 648 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 OR6C4Q8NGE1 309 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 MUL1Q969V5 352 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 DOK1Q99704 481 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 RBCK1Q9BYM8 510 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 PLCXD1Q9NUJ7 323 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 KLHL3Q9UH77 587 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 SATB2Q9UPW6 733 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 ZNF443Q9Y2A4 671 aaPredicted RBP17.76■□□□□ 0.43
PSPC1-206ENST00000619300 PCDHGA10Q9Y5H3 936 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 GABRB1P18505 474 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 MAT1AQ00266 395 aaKnown RBP17.76■□□□□ 0.43
PSPC1-206ENST00000619300 TEKQ02763 1124 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 DUSP8Q13202 625 aa17.76■□□□□ 0.43
PSPC1-206ENST00000619300 LARS2Q15031 903 aaKnown RBP17.76■□□□□ 0.43
PSPC1-206ENST00000619300 CCNJQ5T5M9 372 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms