RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ADAM29Q9UKF5 820 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 ITGB1BP2Q9UKP3 347 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 VPS4AQ9UN37 437 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 MAPRE3Q9UPY8 281 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 WBP11Q9Y2W2 641 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 POLR3HQ9Y535 204 aaPredicted RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 UTP20O75691 2785 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 DIDO1Q9BTC0 2240 aaKnown RBP4.89□□□□□ -1.63
SHMT1-211ENST00000618902 LRBAP50851 2863 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 DOPEY2Q9Y3R5 2298 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 RNF103-CHMP3A0A140T963 221 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 DHRS12A0PJE2 317 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 FAM234BA2RU67 622 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PRORSD1PA6NEY8 169 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 A6NL46 340 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 TTLL8A6PVC2 850 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 SLC28A1O00337 649 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PCDH7O60245 1069 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PRKNO60260 465 aaPredicted RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 MAN1A2O60476 641 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PRMT3O60678 531 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CTNSO60931 367 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 DEAF1O75398 565 aaPredicted RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CRCPO75575 148 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 RSL1D1O76021 490 aaKnown RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 RASAL1O95294 804 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 HPRP00739 348 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CRYABP02511 175 aaKnown RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CLPSP04118 112 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ALDOCP09972 364 aaKnown RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CT62P0C5K7 136 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 NR2F6P10588 404 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ITGAMP11215 1152 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CD1EP15812 388 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 SDC1P18827 310 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CDH2P19022 906 aaPredicted RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CPN2P22792 545 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ITGA3P26006 1051 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 SOX11P35716 441 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ST13P50502 369 aaKnown RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 MAPK12P53778 367 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ERVK-8P63133 956 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 RPL38P63173 70 aaKnown RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CSNK2BP67870 215 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 TLE1Q04724 770 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 EMX2Q04743 252 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ACSM2AQ08AH3 577 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 MGAT2Q10469 447 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 MERTKQ12866 999 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 DUSP8Q13202 625 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 IL18R1Q13478 541 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 RAPSNQ13702 412 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 NR6A1Q15406 480 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 NSDHLQ15738 373 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 MEP1AQ16819 746 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 MPEG1Q2M385 716 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 SLC36A3Q495N2 470 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF385BQ569K4 471 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 C6orf136Q5SQH8 315 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CCNYL2Q5T2Q4 361 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 NDUFAF5Q5TEU4 345 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 MFSD4BQ5TF39 518 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 FOXB2Q5VYV0 432 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 TTC23Q5W5X9 447 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ACSM2BQ68CK6 577 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 NOXRED1Q6NXP6 359 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PAPD4Q6PIY7 484 aaKnown RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PAOXQ6QHF9 649 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CYP20A1Q6UW02 462 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PAGE2Q7Z2X7 111 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 GPR141Q7Z602 305 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CHERPQ8IWX8 916 aaKnown RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 DDIASQ8IXT1 998 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 SAMD14Q8IZD0 417 aaPredicted RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 EID3Q8N140 333 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 TMEM132CQ8N3T6 1108 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 DHRSXQ8N5I4 330 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 POGLUT1Q8NBL1 392 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 SIMC1Q8NDZ2 872 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CLHC1Q8NHS4 586 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 DNAJB14Q8TBM8 379 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CPT1CQ8TCG5 803 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PTPMT1Q8WUK0 201 aaPredicted RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 TANKQ92844 425 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 MIB2Q96AX9 1013 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 LRRC58Q96CX6 371 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CNRIP1Q96F85 164 aaPredicted RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 POM121Q96HA1 1249 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ART5Q96L15 291 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PPP3R2Q96LZ3 170 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CNBD2Q96M20 576 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF681Q96N22 645 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 FAM210AQ96ND0 272 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PRPF18Q99633 342 aaKnown RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ALOXE3Q9BYJ1 711 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 RBM38Q9H0Z9 239 aaKnown RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 RPF2Q9H7B2 306 aaKnown RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 COQ10BQ9H8M1 238 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 AKTIPQ9H8T0 292 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 TRIM45Q9H8W5 580 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms