RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 H3BSH0 61 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 SMAD9O15198 467 aaKnown RBP12.42□□□□□ -0.42
MSH6-214ENST00000616033 SLC43A1O75387 559 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 CATP04040 527 aaKnown RBP12.42□□□□□ -0.42
MSH6-214ENST00000616033 RAF1P04049 648 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 EIF4EP06730 217 aaKnown RBP12.42□□□□□ -0.42
MSH6-214ENST00000616033 SLC6A11P48066 632 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 ACLYP53396 1101 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 BICRALQ6AI39 1079 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 FCRLBQ6BAA4 426 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 FUT10Q6P4F1 479 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 COMTD1Q86VU5 262 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 MACROD1Q9BQ69 325 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 CACNG6Q9BXT2 260 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 METTL17Q9H7H0 456 aaPredicted RBP12.42□□□□□ -0.42
MSH6-214ENST00000616033 SRRDQ9UH36 339 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 MGAT4BQ9UQ53 548 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 TRBV23-1A0A0A0MS06 115 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 PROM1O43490 865 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 GPR37L1O60883 481 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 REM1O75628 298 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 FURINP09958 794 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 ARAFP10398 606 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 AP1S1P61966 158 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 TSPAN5P62079 268 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 TBPL1P62380 186 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 IRF5Q13568 498 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 ELOAQ14241 798 aaKnown RBP12.41□□□□□ -0.42
MSH6-214ENST00000616033 TCEA2Q15560 299 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 GGTA1PQ4G0N0 100 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 TMEM91Q6ZNR0 172 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 KIF18BQ86Y91 864 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 ZNF527Q8NB42 609 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 FBXO22Q8NEZ5 403 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 NARS2Q96I59 477 aaKnown RBP12.41□□□□□ -0.42
MSH6-214ENST00000616033 RIOK2Q9BVS4 552 aaKnown RBP12.41□□□□□ -0.42
MSH6-214ENST00000616033 TDP1Q9NUW8 608 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 APOC3P02656 99 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 C8orf89P0DMQ9 161 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 IMPA1P29218 277 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 C6orf120Q7Z4R8 191 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 CMTM8Q8IZV2 173 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 BMPERQ8N8U9 685 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 TMEM163Q8TC26 289 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 AUTS2Q8WXX7 1259 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 COQ10AQ96MF6 247 aa12.41□□□□□ -0.42
MSH6-214ENST00000616033 PRR23D1E9PI22 279 aaPredicted RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 SHOXO15266 292 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 MAGEB4O15481 346 aaPredicted RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 DUSP11O75319 330 aaKnown RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 MPC2O95563 127 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 PRR23D2P0DMB1 279 aaPredicted RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 TFPIP10646 304 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 NUDT1P36639 197 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 GPR17Q13304 367 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 ANGPT1Q15389 498 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 LGALSLQ3ZCW2 172 aaPredicted RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 SPIN4Q56A73 249 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 SPOUT1Q5T280 376 aaKnown RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 ZNF770Q6IQ21 691 aaPredicted RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 ALKAL2Q6UX46 152 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 TRAPPC5Q8IUR0 188 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 TOMM5Q8N4H5 51 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 OR6T1Q8NGN1 323 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 CHTF18Q8WVB6 975 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 FOPNLQ96NB1 174 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 F2RL3Q96RI0 385 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 RNF32Q9H0A6 362 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 KCNN2Q9H2S1 579 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 ZNF768Q9H5H4 540 aaKnown RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 DDX31Q9H8H2 851 aaKnown RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 TAS2R7Q9NYW3 318 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 UBQLN2Q9UHD9 624 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 DIMT1Q9UNQ2 313 aaKnown RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 TMEM5Q9Y2B1 443 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 DYRK1BQ9Y463 629 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 HRH3Q9Y5N1 445 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 FEZF1A0PJY2 475 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 M0R233 179 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 SOCS6O14544 535 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 CA12O43570 354 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 ALDOBP05062 364 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 URODP06132 367 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 LIMS3P0CW19 117 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 LIMS4P0CW20 117 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 GNSP15586 552 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 SLC11A1P49279 550 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 TAS2R41P59536 307 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 KIAA1024LP59773 190 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 SNRPGP62308 76 aaKnown RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 MRPL58Q14197 206 aaKnown RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 TMEM220Q6QAJ8 160 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 RPTNQ6XPR3 784 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 TPRG1Q6ZUI0 275 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 DBF4BQ8NFT6 615 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 OR10H4Q8NGA5 316 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 LINC00052Q96N35 136 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 TEFMQ96QE5 360 aaKnown RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 OR51V1Q9H2C8 321 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 IFT46Q9NQC8 304 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms