RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 EFR3AQ14156 821 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PUM1Q14671 1186 aaKnown RBP eCLIP10.22□□□□□ -0.773e-7■□□□□ 10.8
SENP3-EIF4A1-201ENST00000614237 IRF4Q15306 451 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SPRED2Q7Z698 418 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SFTPA1Q8IWL2 248 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC38A5Q8WUX1 472 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CAMK1GQ96NX5 476 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 DPCDQ9BVM2 203 aaPredicted RBP10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TAC3Q9UHF0 121 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SPIN1Q9Y657 262 aaPredicted RBP10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MYO7AQ13402 2215 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 KIAA0100Q14667 2235 aaKnown RBP10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 HMGN4O00479 90 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SCO2O43819 266 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CCNB2O95067 398 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CEACAM5P06731 702 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 KIAA1024LP59773 190 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FGL2Q14314 439 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 INSL4Q14641 139 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZNF776Q68DI1 518 aaPredicted RBP10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 KIAA1211LQ6NV74 962 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 BPHLQ86WA6 291 aaPredicted RBP10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FAM109AQ8N4B1 249 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SNX18Q96RF0 628 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TVP23BQ9NYZ1 205 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC23A1Q9UHI7 598 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MGAT4BQ9UQ53 548 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PLK4O00444 970 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FAAHO00519 579 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IFNW1P05000 195 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CRTC2Q53ET0 693 aaPredicted RBP10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FAM205BPQ63HN1 556 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TUBA3EQ6PEY2 450 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IL20RBQ6UXL0 311 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 USP30Q70CQ3 517 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 AQP11Q8NBQ7 271 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC37A3Q8NCC5 494 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ASB15Q8WXK1 588 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C1QTNF7Q9BXJ2 289 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CHIAQ9BZP6 476 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC25A19Q9HC21 320 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MBNL1Q9NR56 388 aaKnown RBP10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CRNNQ9UBG3 495 aaPredicted RBP10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 POLHQ9Y253 713 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ALPK2Q86TB3 2170 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 POM121CA8CG34 1229 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MAN2B1O00754 1011 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MID1O15344 667 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 B4GALT2O60909 372 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 HRGP04196 525 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PSMA1P25786 263 aaKnown RBP10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SDC2P34741 201 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 EVI2BP34910 448 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC9A3P48764 834 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 GNA13Q14344 377 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OR2G6Q5TZ20 316 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 LACC1Q8IV20 430 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IQCF2Q8IXL9 164 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 HORMAD2Q8N7B1 307 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C12orf76Q8N812 135 aaPredicted RBP10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NACC2Q96BF6 587 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 COL21A1Q96P44 957 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IL17FQ96PD4 163 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ACAT2Q9BWD1 397 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 BARHL1Q9BZE3 327 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 AICDAQ9GZX7 198 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC22A4Q9H015 551 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CUEDC1Q9NWM3 386 aaPredicted RBP10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 REV1Q9UBZ9 1251 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CES1P1Q9UKY3 287 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CFL2Q9Y281 166 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ASB4Q9Y574 426 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ALG5Q9Y673 324 aa10.21□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FFAR1O14842 300 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OR10H3O60404 316 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ENTPD6O75354 484 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PCCBP05166 539 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TIE1P35590 1138 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ATP6V1E1P36543 226 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 KIR2DL3P43628 341 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 AVPR1BP47901 424 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MEF2AQ02078 507 aaPredicted RBP10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ITPRIPL2Q3MIP1 535 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 C12orf73Q69YU5 71 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZNF425Q6IV72 752 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CEACAM20Q6UY09 585 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 DEF8Q6ZN54 512 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 C6orf120Q7Z4R8 191 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TCEANCQ8N8B7 351 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MFSD9Q8NBP5 474 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SRFBP1Q8NEF9 429 aaKnown RBP10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 BBS10Q8TAM1 723 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 FAIM2Q9BWQ8 316 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PLA2G2FQ9BZM2 168 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PRDM7Q9NQW5 492 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 IL20RAQ9UHF4 553 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 KLF15Q9UIH9 416 aa10.21□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ASCC3Q8N3C0 2202 aaKnown RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LOC105369274A0A096LPK9 316 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 A0A1W2PRQ8 180 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms