RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 ABRACLQ9P1F3 81 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 BOLA1Q9Y3E2 137 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF175Q9Y473 711 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 LRP6O75581 1613 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 CICQ96RK0 1608 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-211ENST00000613795 PIRO00625 290 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 CTDSP2O14595 271 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 PPP1R2P9O14990 202 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 APBB3O95704 486 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 CH25HO95992 272 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 AK1P00568 194 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 PRKAR1BP31321 381 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 STC1P52823 247 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 VSX2P58304 361 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-211ENST00000613795 CHRNA6Q15825 494 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 TOR2AQ5JU69 321 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 ALKAL2Q6UX46 152 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF574Q6ZN55 896 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-211ENST00000613795 SLC46A3Q7Z3Q1 461 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 TPRA1Q86W33 373 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 MRPL41Q8IXM3 137 aaKnown RBP6.55□□□□□ -1.36
CLCN3-211ENST00000613795 DTWD1Q8N5C7 304 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 POC1BQ8TC44 478 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 METTL17Q9H7H0 456 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-211ENST00000613795 NOX3Q9HBY0 568 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-211ENST00000613795 YARS2Q9Y2Z4 477 aaKnown RBP6.55□□□□□ -1.36
CLCN3-211ENST00000613795 HS3ST4Q9Y661 456 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 ARL5AQ9Y689 179 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 TOPAZ1Q8N9V7 1692 aa6.55□□□□□ -1.36
CLCN3-211ENST00000613795 E2F3O00716 465 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 RAF1P04049 648 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 GIFP27352 417 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 CHRNA4P43681 627 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 PTH2RP49190 550 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 RACK1P63244 317 aaKnown RBP6.54□□□□□ -1.36
CLCN3-211ENST00000613795 TLE3Q04726 772 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 UGT3A2Q3SY77 523 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 ZER1Q7Z7L7 766 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 THOC6Q86W42 341 aaKnown RBP6.54□□□□□ -1.36
CLCN3-211ENST00000613795 FAM129CQ86XR2 697 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 TRAM1L1Q8N609 369 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 DNAJC5GQ8N7S2 189 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 MAPK15Q8TD08 544 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 IRF7Q92985 503 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 MAP6Q96JE9 813 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 MTERF1Q99551 399 aaKnown RBP6.54□□□□□ -1.36
CLCN3-211ENST00000613795 LIN7BQ9HAP6 207 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 Q9N2J8 555 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 TMPRSS11EQ9UL52 423 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 NUP188Q5SRE5 1749 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF726A6NNF4 738 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 ARNTLO00327 626 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF208O43345 1280 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 CACNG3O60359 315 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 RPP14O95059 124 aaKnown RBP6.54□□□□□ -1.36
CLCN3-211ENST00000613795 FCER2P06734 321 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 SYN1P17600 705 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 CXCR1P25024 350 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 CNR2P34972 360 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 SOX9P48436 509 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 RAB40BQ12829 278 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 SLBPQ14493 270 aaKnown RBP eCLIP6.54□□□□□ -1.36
CLCN3-211ENST00000613795 DECR1Q16698 335 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 ARSIQ5FYB1 569 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 FBXL22Q6P050 247 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 ARHGAP11AQ6P4F7 1023 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 C22orf39Q6P5X5 142 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF546Q86UE3 836 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 LILRA2Q8N149 483 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 B3GNT7Q8NFL0 401 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF516Q92618 1163 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 BORCS6Q96GS4 357 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 MICU1Q9BPX6 476 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 RNF19AQ9NV58 838 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 GPRC5BQ9NZH0 403 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 CD84Q9UIB8 345 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 SLC35F4A4IF30 521 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 SCDO00767 359 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 ADAMTS3O15072 1205 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 HPGDSO60760 199 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 MMP20O60882 483 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 NIPSNAP2O75323 286 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 AQP2P41181 271 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 MAGEB1P43366 347 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 CLDN8P56748 225 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 HERV-K104P61576 105 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 SLC22A25Q6T423 547 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 PIM3Q86V86 326 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 SLC5A8Q8N695 610 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 CCDC54Q8NEL0 328 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 RNF141Q8WVD5 230 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 SLC2A13Q96QE2 648 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 NPY6RQ99463 290 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 SLC19A3Q9BZV2 496 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 C11orf54Q9H0W9 315 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-211ENST00000613795 CTPS2Q9NRF8 586 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 PRODH2Q9UF12 536 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 SPO11Q9Y5K1 396 aa6.54□□□□□ -1.36
CLCN3-211ENST00000613795 FAM230AA0A1W2PPH8 454 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms