RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 CDCP1Q9H5V8 836 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 KAT8Q9H7Z6 458 aaKnown RBP13.61□□□□□ -0.23
CD48-203ENST00000613788 OR10H1Q9Y4A9 318 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 APC2O95996 2303 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 TMEM247A6NEH6 219 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 TMEM200CA6NKL6 621 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 WWP2O00308 870 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 TO15178 435 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 GYG2O15488 501 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 OR12D1P0DN82 309 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 ETFAP13804 333 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 CCL11P51671 97 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 SLC7A2P52569 658 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 CORO7P57737 925 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 DSTNP60981 165 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 SELPLGQ14242 412 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 DUSP5Q16690 384 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 MEP1AQ16819 746 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 CYP27C1Q4G0S4 372 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 DNAL1Q4LDG9 190 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 PIGGQ5H8A4 983 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 GPR155Q7Z3F1 870 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 COX18Q8N8Q8 333 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 OR5D16Q8NGK9 328 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 SLC22A8Q8TCC7 542 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 SNRNP27Q8WVK2 155 aaKnown RBP13.6□□□□□ -0.23
CD48-203ENST00000613788 PSMF1Q92530 271 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 SLC7A6OSQ96CW6 309 aaPredicted RBP13.6□□□□□ -0.23
CD48-203ENST00000613788 BTBD10Q9BSF8 475 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 BTBD2Q9BX70 525 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 TRIM8Q9BZR9 551 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 NXF5Q9H1B4 397 aaKnown RBP13.6□□□□□ -0.23
CD48-203ENST00000613788 SERHL2Q9H4I8 314 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 LIN28AQ9H9Z2 209 aaKnown RBP13.6□□□□□ -0.23
CD48-203ENST00000613788 ADA2Q9NZK5 511 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 MRTO4Q9UKD2 239 aaKnown RBP13.6□□□□□ -0.23
CD48-203ENST00000613788 LIPT1Q9Y234 373 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 YARS2Q9Y2Z4 477 aaKnown RBP13.6□□□□□ -0.23
CD48-203ENST00000613788 FRYQ5TBA9 3013 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 PCSK5Q92824 1860 aa13.6□□□□□ -0.23
CD48-203ENST00000613788 A6NL46 340 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 HMGN4O00479 90 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 AK1P00568 194 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 BMP2P12643 396 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 TRHRP34981 398 aaPredicted RBP13.59□□□□□ -0.23
CD48-203ENST00000613788 MLF1P58340 268 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 POU6F2P78424 691 aaPredicted RBP13.59□□□□□ -0.23
CD48-203ENST00000613788 GNA13Q14344 377 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 CYP51A1Q16850 503 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 CRB2Q5IJ48 1285 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 ACER2Q5QJU3 275 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 NPSR1Q6W5P4 371 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 SERPINA11Q86U17 422 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 SIRT6Q8N6T7 355 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 OR10A6Q8NH74 314 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 PIK3R3Q92569 461 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 CDS1Q92903 461 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 RAB8BQ92930 207 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 CDRT15Q96T59 188 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 SPATA9Q9BWV2 254 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 CMTM6Q9NX76 183 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 ABI3Q9P2A4 366 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 TMEM181Q9P2C4 612 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 ABCD2Q9UBJ2 740 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 CBLCQ9ULV8 474 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 ACACAQ13085 2346 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 DNAJA2O60884 412 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 TNFRSF21O75509 655 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 ITGA10O75578 1167 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 OR2J2O76002 312 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 NAGAP17050 411 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 KRT20P35900 424 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 PIGAP37287 484 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 PSMD4P55036 377 aaKnown RBP13.59□□□□□ -0.23
CD48-203ENST00000613788 EEFSECP57772 596 aaKnown RBP13.59□□□□□ -0.23
CD48-203ENST00000613788 CXADRP78310 365 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 NNATQ16517 81 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 DECR1Q16698 335 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 SPATS1Q496A3 300 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 LACTB2Q53H82 288 aaPredicted RBP13.59□□□□□ -0.23
CD48-203ENST00000613788 GCNT6Q5T4J0 391 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 ABHD17BQ5VST6 288 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 AGAP7PQ5VUJ5 663 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 FCRLBQ6BAA4 426 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 BORAQ6PGQ7 559 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 BNC2Q6ZN30 1099 aaPredicted RBP13.59□□□□□ -0.23
CD48-203ENST00000613788 C16orf62Q7Z3J2 963 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 YTHDF3Q7Z739 585 aaKnown RBP13.59□□□□□ -0.23
CD48-203ENST00000613788 ARHGAP24Q8N264 748 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 OTUB1Q96FW1 271 aaPredicted RBP13.59□□□□□ -0.23
CD48-203ENST00000613788 AGAP4Q96P64 663 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 STMN3Q9NZ72 180 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 P2RX2Q9UBL9 471 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 NPFFR2Q9Y5X5 522 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 KCNE3Q9Y6H6 103 aa13.59□□□□□ -0.23
CD48-203ENST00000613788 A8MVJ9 347 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 NME4O00746 187 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 CDK2AP1O14519 115 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 DNAJB5O75953 348 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 NR2F1P10589 423 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms