RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-233	ENST00000612121	EEFSEC	P57772	596 aa	Known RBP	13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	LIPJ	Q5W064	366 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	FAM214B	Q7L5A3	538 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	MYLK4	Q86YV6	388 aa	Predicted RBP	13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	WFDC8	Q8IUA0	241 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	GBP7	Q8N8V2	638 aa	Predicted RBP	13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	RNF138	Q8WVD3	245 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	TMBIM1	Q969X1	311 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	SLC35A4	Q96G79	324 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	BRINP2	Q9C0B6	783 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	ALG9	Q9H6U8	611 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	SMYD2	Q9NRG4	433 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	PLSCR4	Q9NRQ2	329 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	CDC42EP3	Q9UKI2	254 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	PLLP	Q9Y342	182 aa		13.91	□□□□□ -0.18
LTBP4-233	ENST00000612121	C17orf51	A8MQB3	221 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	ADAM11	O75078	769 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	REM1	O75628	298 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	IGHV4-39	P01824	125 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	ATP1B1	P05026	303 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	CDKN1A	P38936	164 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	EMD	P50402	254 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	NEK2	P51955	445 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	DSCR4	P56555	118 aa	Predicted RBP	13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	PHEX	P78562	749 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	ILF2	Q12905	390 aa	Known RBP	13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	MORF4L2	Q15014	288 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	PON3	Q15166	354 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	ISCA2	Q86U28	154 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	TEX9	Q8N6V9	391 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	ADCY4	Q8NFM4	1077 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	RAB3IL1	Q8TBN0	382 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	STAG3L4	Q8TBR4	150 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	WDR20	Q8TBZ3	569 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	ATOH8	Q96SQ7	321 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	ADO	Q96SZ5	270 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	LRRC1	Q9BTT6	524 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	CES1P1	Q9UKY3	287 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	ZNF337	Q9Y3M9	751 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	ALPK2	Q86TB3	2170 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	PCNX3	Q9H6A9	2034 aa		13.9	□□□□□ -0.18
LTBP4-233	ENST00000612121	UBXN8	O00124	270 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	FOXE1	O00358	373 aa	Predicted RBP	13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	GPRIN2	O60269	458 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	TSPAN2	O60636	221 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	AQP8	O94778	261 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	SEMA3D	O95025	777 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	STMN1	P16949	149 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	FASTKD3	Q14CZ7	662 aa	Known RBP	13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	TRMT12	Q53H54	448 aa	Known RBP	13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	C6orf52	Q5T4I8	152 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	FBXO36	Q8NEA4	188 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	OR52R1	Q8NGF1	315 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	GTPBP3	Q969Y2	492 aa	Known RBP	13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	GPR22	Q99680	433 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	C19orf24	Q9BVV8	132 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	ACTR6	Q9GZN1	396 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	PRODH2	Q9UF12	536 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	LIPT1	Q9Y234	373 aa		13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.89	□□□□□ -0.19
LTBP4-233	ENST00000612121	CAD	P27708	2225 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	SUPT3H	B4E1H0	165 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	SEC14L5	O43304	696 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	NDUFS7	O75251	213 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	SUPT3H	O75486	399 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	KLK1	P06870	262 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	CDC25B	P30305	580 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	FEN1	P39748	380 aa	Known RBP	13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	ARL4C	P56559	192 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	CLDN20	P56880	219 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	GPX6	P59796	221 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	DUSP2	Q05923	314 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	DLG1	Q12959	904 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	RAET1L	Q5VY80	246 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	SLC48A1	Q6P1K1	146 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	METTL25	Q8N6Q8	603 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	FADS6	Q8N9I5	356 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	OR4K17	Q8NGC6	315 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	OR6K3	Q8NGY3	331 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	ACTRT1	Q8TDG2	376 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	SMAP2	Q8WU79	429 aa	Predicted RBP	13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	FBXW5	Q969U6	566 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	DDX47	Q9H0S4	455 aa	Known RBP	13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	OR10A4	Q9H209	315 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	DSN1	Q9H410	356 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	WHRN	Q9P202	907 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	JRKL	Q9Y4A0	524 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	PCDHA9	Q9Y5H5	950 aa		13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121	YLPM1	P49750	1951 aa	Known RBP	13.88	□□□□□ -0.19
LTBP4-233	ENST00000612121		A0A096LNT2	108 aa		13.87	□□□□□ -0.19
LTBP4-233	ENST00000612121	GOLGA6L10	A0A0M3HER8	536 aa		13.87	□□□□□ -0.19
LTBP4-233	ENST00000612121	GOLGA6L10	A6NI86	522 aa		13.87	□□□□□ -0.19
LTBP4-233	ENST00000612121	CXorf49	A8MYA2	514 aa	Predicted RBP	13.87	□□□□□ -0.19
LTBP4-233	ENST00000612121	LINC01387	J3KSC0	135 aa		13.87	□□□□□ -0.19
LTBP4-233	ENST00000612121	UGDH	O60701	494 aa		13.87	□□□□□ -0.19
LTBP4-233	ENST00000612121	KERA	O60938	352 aa		13.87	□□□□□ -0.19
LTBP4-233	ENST00000612121	ALDOA	P04075	364 aa	Known RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms