RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 RAET1LQ5VY80 246 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 PPP4R4Q6NUP7 873 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 GTF2H2CQ6P1K8 395 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 FAM111BQ6SJ93 734 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 LRRC8AQ8IWT6 810 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 ZNF610Q8N9Z0 462 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 ATOH8Q96SQ7 321 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 ADOQ96SZ5 270 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 PRRG4Q9BZD6 226 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 IPPKQ9H8X2 491 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 PFDN4Q9NQP4 134 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 YAE1D1Q9NRH1 226 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 ZNF701Q9NV72 531 aaPredicted RBP15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 PPP4R1LQ9P1A2 415 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 SNX12Q9UMY4 172 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 PLLPQ9Y342 182 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 ZNF780BQ9Y6R6 833 aa15.66■□□□□ 0.1
CHMP4A-211ENST00000609024 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 FRG2CA6NGY1 282 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 LRRC14BA6NHZ5 514 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 CXorf49A8MYA2 514 aaPredicted RBP15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 CLDN9O95484 217 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 PLGP00747 810 aaPredicted RBP15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 ATP1B1P05026 303 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 S1PR1P21453 382 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 GRK2P25098 689 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 SSTR1P30872 391 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 CCKARP32238 428 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 DSCR4P56555 118 aaPredicted RBP15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 RPS3AP61247 264 aaKnown RBP15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 RPS4XP62701 263 aaKnown RBP15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 MRPS22P82650 360 aaKnown RBP15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 ETFDHQ16134 617 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 SGCBQ16585 318 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 GRTP1Q5TC63 336 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 SH2D5Q6ZV89 423 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 GAS2L3Q86XJ1 694 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 PHC2Q8IXK0 858 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 SLC35F6Q8N357 371 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 MAPK1IP1LQ8NDC0 245 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 FIG4Q92562 907 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 GFM2Q969S9 779 aaKnown RBP15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 KLHL29Q96CT2 875 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 LRRC1Q9BTT6 524 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 MAT2BQ9NZL9 334 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 HEY2Q9UBP5 337 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 ADAM29Q9UKF5 820 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 EMC9Q9Y3B6 208 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 RNF11Q9Y3C5 154 aa15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 TNPO3Q9Y5L0 923 aaKnown RBP15.65■□□□□ 0.1
CHMP4A-211ENST00000609024 E7ESA3 106 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 HS3ST1O14792 307 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 TLX2O43763 284 aaPredicted RBP15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 TNFRSF21O75509 655 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 BCAS2O75934 225 aaPredicted RBP15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 FCGR2AP12318 317 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 HK1P19367 917 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 IDUAP35475 653 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 ALDH18A1P54886 795 aaKnown RBP15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 GPX6P59796 221 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 PSPHP78330 225 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 OCRLQ01968 901 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 IFT88Q13099 833 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 SLC48A1Q6P1K1 146 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 CMC1Q7Z7K0 106 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 HEATR5AQ86XA9 2040 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 WFDC8Q8IUA0 241 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 ZNF611Q8N823 705 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 WDR20Q8TBZ3 569 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 GTPBP3Q969Y2 492 aaKnown RBP15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 MARK4Q96L34 752 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 FAIM2Q9BWQ8 316 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 SAYSD1Q9NPB0 183 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 SDHAF3Q9NRP4 125 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 LAMP3Q9UQV4 416 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 ACOT9Q9Y305 439 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 ZNF175Q9Y473 711 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 PCDHA9Q9Y5H5 950 aa15.64■□□□□ 0.09
CHMP4A-211ENST00000609024 LINC01387J3KSC0 135 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 TO15178 435 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 ZIC3O60481 467 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 TCP1P17987 556 aaKnown RBP15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 ALDH9A1P49189 494 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 CCNG1P51959 295 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 CTBP2P56545 445 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 PON3Q15166 354 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 FAM83EQ2M2I3 478 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 ERCC6LQ2NKX8 1250 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 CHRFAM7AQ494W8 412 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 C10orf62Q5T681 223 aaPredicted RBP15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 ALKBH2Q6NS38 261 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 KLC3Q6P597 504 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 LARP4Q71RC2 724 aaKnown RBP eCLIP15.63■□□□□ 0.094e-10■■□□□ 13.7
CHMP4A-211ENST00000609024 FAM214BQ7L5A3 538 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 GOLGA7Q7Z5G4 137 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 MILR1Q7Z6M3 343 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 PPM1NQ8N819 430 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 FNDC9Q8TBE3 224 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 SLC35A4Q96G79 324 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 PLPPR2Q96GM1 343 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms