RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 TRIM77I1YAP6 450 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 CASC3O15234 703 aaKnown RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 OR1F1O43749 312 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 OR2B3O76000 313 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 ADH5P11766 374 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 FGF9P31371 208 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 GABRA5P31644 462 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 MTNR1AP48039 350 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 PPP3R1P63098 170 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 CD83Q01151 205 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 MINDY4Q4G0A6 757 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 OR2G6Q5TZ20 316 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 SLC27A4Q6P1M0 643 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 BHLHB9Q6PI77 547 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 ZNF782Q6ZMW2 699 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 YIPF7Q8N8F6 280 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 SUN3Q8TAQ9 357 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 TM9SF4Q92544 642 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 NR4A3Q92570 626 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 UCN3Q969E3 161 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 CAMK1GQ96NX5 476 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 SLC38A2Q96QD8 506 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 DPH7Q9BTV6 452 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 PRRG3Q9BZD7 231 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 SAP130Q9H0E3 1048 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 RERGLQ9H628 205 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 SLC35C2Q9NQQ7 365 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 TMEM39AQ9NV64 488 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 GLTPQ9NZD2 209 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 TNFRSF10DQ9UBN6 386 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 SLC27A6Q9Y2P4 619 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 PCYT1BQ9Y5K3 369 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 HCFC2Q9Y5Z7 792 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 A0A0A6YYD5 115 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 A0A0G2JPF8 293 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 HNRNPCL2B2RXH8 293 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 HNRNPCL3B7ZW38 293 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 EPPINO95925 133 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 CHRM5P08912 532 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 HNRNPCL4P0DMR1 293 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 PSKH1P11801 424 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 NTSP30990 170 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 UQCRC1P31930 480 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 BUD31P41223 144 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 NCBP2P52298 156 aaKnown RBP eCLIP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 SRP54P61011 504 aaKnown RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 C9orf64Q5T6V5 341 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 NDUFAF5Q5TEU4 345 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 LCN1P1Q5VSP4 162 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 TMEM64Q6YI46 380 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 ERN2Q76MJ5 926 aaKnown RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 KIF18BQ86Y91 864 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 CAMKK1Q8N5S9 505 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 LHFPL5Q8TAF8 219 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 DNAJA4Q8WW22 397 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 SLC9A6Q92581 669 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 ZC3HAV1LQ96H79 300 aaKnown RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 COX14Q96I36 57 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 ZSWIM3Q96MP5 696 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 BBS4Q96RK4 519 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 ARHGAP9Q9BRR9 750 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 PINK1Q9BXM7 581 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 LIN7BQ9HAP6 207 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 PAK6Q9NQU5 681 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 WDR70Q9NW82 654 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 SLC23A2Q9UGH3 650 aa13.79□□□□□ -0.2
CTCFL-219ENST00000608720 YARS2Q9Y2Z4 477 aaKnown RBP13.79□□□□□ -0.2
CTCFL-219ENST00000608720 EDDM13A0A1B0GTR0 161 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 TRDV1A0A1B0GX56 115 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 CLEC3AO75596 197 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 PDGFAP04085 211 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 CHRM4P08173 479 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 RAB25P57735 213 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 LSM11P83369 360 aaKnown RBP eCLIP13.78□□□□□ -0.2
CTCFL-219ENST00000608720 QPRTQ15274 297 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 HNRNPA1L2Q32P51 320 aaKnown RBP13.78□□□□□ -0.2
CTCFL-219ENST00000608720 FNDC3BQ53EP0 1204 aaKnown RBP13.78□□□□□ -0.2
CTCFL-219ENST00000608720 PRAMEF8Q5VWM4 474 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 PRAMEF7Q5VXH5 474 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 CD200R1LQ6Q8B3 271 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 AMIGO1Q86WK6 493 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 AMER3Q8N944 861 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 PLA2G15Q8NCC3 412 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 LRRC20Q8TCA0 184 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 NRTNQ99748 197 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 MENTQ9BUN1 341 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 PLA2G12AQ9BZM1 189 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 KCNN2Q9H2S1 579 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 EGLN3Q9H6Z9 239 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 MAT2BQ9NZL9 334 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 A0A087WUU8 490 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 A0A0B4J293 547 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 A0A1W2PPV9 198 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 KDM4EB2RXH2 506 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-219ENST00000608720 PLA2G10O15496 165 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 PROM1O43490 865 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 HCN1O60741 890 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 EFCAB14O75071 495 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 OR7A10O76100 309 aa13.78□□□□□ -0.2
CTCFL-219ENST00000608720 FHP07954 510 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms