RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 DPPA2Q7Z7J5 298 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 CMIPQ8IY22 773 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 TCEANCQ8N8B7 351 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 OR10H5Q8NGA6 315 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 ZCCHC2Q9C0B9 1178 aaKnown RBP11.87□□□□□ -0.51
CTCFL-218ENST00000608440 LINC00597Q9H2U6 94 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 MTG2Q9H4K7 406 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 ZAR1LA6NP61 321 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 C1orf196B1AJZ1 125 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 MPZL2O60487 215 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 CPSF4O95639 269 aaKnown RBP11.87□□□□□ -0.51
CTCFL-218ENST00000608440 ADH1CP00326 375 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 GASTP01350 101 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 PEPDP12955 493 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 NR2C1P13056 603 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 CHI3L1P36222 383 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-218ENST00000608440 TSPAN7P41732 249 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 PITPNBP48739 271 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 EPHA4P54764 986 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 PSMA6P60900 246 aaKnown RBP11.87□□□□□ -0.51
CTCFL-218ENST00000608440 MAXP61244 160 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 POU4F2Q12837 409 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 MAP2K5Q13163 448 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 CCL14Q16627 93 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 LRIF1Q5T3J3 769 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 C17orf99Q6UX52 265 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 DNAJB7Q7Z6W7 309 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-218ENST00000608440 SLC30A8Q8IWU4 369 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 CELF5Q8N6W0 485 aaKnown RBP11.87□□□□□ -0.51
CTCFL-218ENST00000608440 C20orf85Q9H1P6 137 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 ZNF69Q9UC07 566 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 NEU3Q9UQ49 428 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 CA5BQ9Y2D0 317 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 SF3B6Q9Y3B4 125 aaKnown RBP11.87□□□□□ -0.51
CTCFL-218ENST00000608440 LOC390937A0A1W2PQ73 354 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 TMEM88BA6NKF7 163 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 ZBTB42B2RXF5 422 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 RFXAPO00287 272 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 CDC123O75794 336 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-218ENST00000608440 UBXN7O94888 489 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 LGALS2P05162 132 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 STAG3L1P0CL83 205 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 EDN3P14138 238 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 ZNF8P17098 575 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-218ENST00000608440 ACHEP22303 614 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 CD79BP40259 229 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 BLOC1S1P78537 153 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 SREBF2Q12772 1141 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 ERV3-1Q14264 604 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 ZRANB3Q5FWF4 1079 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 MORN1Q5T089 497 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 C3orf33Q6P1S2 294 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 SERPINA11Q86U17 422 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 TSPAN33Q86UF1 283 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 GPSM1Q86YR5 675 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 NAXDQ8IW45 347 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 WNT8BQ93098 351 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 ZC3H10Q96K80 434 aaKnown RBP11.86□□□□□ -0.51
CTCFL-218ENST00000608440 GPR21Q99679 349 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 CDT1Q9H211 546 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 H3BN98 237 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 SCAMP2O15127 329 aaKnown RBP11.86□□□□□ -0.51
CTCFL-218ENST00000608440 BCKDHAP12694 445 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 G0S2P27469 103 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 SUOXP51687 545 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 BPIFB3P59826 476 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 UBXN2BQ14CS0 331 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 TTLL9Q3SXZ7 439 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 MEDAGQ5VYS4 303 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 BTN2A1Q7KYR7 527 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 PLPPR4Q7Z2D5 763 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 CTU1Q7Z7A3 348 aaKnown RBP11.86□□□□□ -0.51
CTCFL-218ENST00000608440 OR56B4Q8NH76 319 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 TSGA13Q96PP4 275 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 PANX1Q96RD7 426 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 TCEAL7Q9BRU2 100 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 ALX4Q9H161 411 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-218ENST00000608440 MFSD1Q9H3U5 465 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 REEP4Q9H6H4 257 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 TREM2Q9NZC2 230 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 FTSJ1Q9UET6 329 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 OR12D3Q9UGF7 316 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 DLGAP4Q9Y2H0 992 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 RPL36Q9Y3U8 105 aaKnown RBP11.86□□□□□ -0.51
CTCFL-218ENST00000608440 PIAS3Q9Y6X2 628 aa11.86□□□□□ -0.51
CTCFL-218ENST00000608440 DOCK3Q8IZD9 2030 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 TMEM218A2RU14 115 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 UPK3BL1B0FP48 263 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 UPK3BL2E5RIL1 263 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 OR7A17O14581 309 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 RGS14O43566 566 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 GALR3O60755 368 aaPredicted RBP11.85□□□□□ -0.51
CTCFL-218ENST00000608440 WNT1P04628 370 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 PIRTP0C851 137 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 HSD3B1P14060 373 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 NPR2P20594 1047 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 CCR1P32246 355 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 DGCR2P98153 550 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 SNTB2Q13425 540 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms