RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 GMNCA6NCL1 334 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 CCDC154A6NI56 674 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 OR6C70A6NIJ9 312 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 RFXANKO14593 260 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 NME6O75414 186 aaPredicted RBP13.13□□□□□ -0.31
CTSA-219ENST00000607841 REM1O75628 298 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 KCNH1O95259 989 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 HMGN2P05204 90 aaKnown RBP13.13□□□□□ -0.31
CTSA-219ENST00000607841 ALOX5P09917 674 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 CNR1P21554 472 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 IL12BP29460 328 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 LSP1P33241 339 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 GABRA3P34903 492 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 GAB1Q13480 694 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 EFR3AQ14156 821 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 LASP1Q14847 261 aaKnown RBP13.13□□□□□ -0.31
CTSA-219ENST00000607841 DECR1Q16698 335 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 TBCELQ5QJ74 424 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 CGB2Q6NT52 195 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 NPSR1Q6W5P4 371 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 SULF2Q8IWU5 870 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 PRR22Q8IZ63 422 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 BCORP1Q8N888 145 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 POGLUT1Q8NBL1 392 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 OR10G3Q8NGC4 313 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 OR5M3Q8NGP4 307 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 OR9I1Q8NGQ6 314 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 DNAJB8Q8NHS0 232 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 GOT1L1Q8NHS2 421 aaPredicted RBP13.13□□□□□ -0.31
CTSA-219ENST00000607841 CPT1CQ8TCG5 803 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 GPR151Q8TDV0 419 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 SLC9A6Q92581 669 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 JADE3Q92613 823 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 HOXB13Q92826 284 aaPredicted RBP13.13□□□□□ -0.31
CTSA-219ENST00000607841 TMBIM1Q969X1 311 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 TMCO6Q96DC7 493 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 SNRNP40Q96DI7 357 aaKnown RBP13.13□□□□□ -0.31
CTSA-219ENST00000607841 GIMAP5Q96F15 307 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 ITCHQ96J02 903 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 ACTRT3Q9BYD9 372 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 HES7Q9BYE0 225 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 GIN1Q9NXP7 522 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 CBLCQ9ULV8 474 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 VPS4AQ9UN37 437 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 PCDHGB3Q9Y5G1 929 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 RNF103-CHMP3A0A140T963 221 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 DUXAA6NLW8 204 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 PEX1O43933 1283 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 NKX2-2O95096 273 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 ANP32DO95626 131 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 MAP3K8P41279 467 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 PNLIPRP2P54317 469 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 GYS2P54840 703 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 MLLT10P55197 1068 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 FBXW4P57775 412 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 GNGT1P63211 74 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 RCAN2Q14206 197 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 TIGD2Q4W5G0 525 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 AGKQ53H12 422 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 CDC73Q6P1J9 531 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 BLOC1S3Q6QNY0 202 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 GK5Q6ZS86 529 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 ZNF621Q6ZSS3 439 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 C6orf120Q7Z4R8 191 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.12□□□□□ -0.31
CTSA-219ENST00000607841 CPLX4Q7Z7G2 160 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 FBXW8Q8N3Y1 598 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 CPSF7Q8N684 471 aaKnown RBP13.12□□□□□ -0.31
CTSA-219ENST00000607841 OR5AK3PQ8NH89 298 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 SPPL2AQ8TCT8 520 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 ADAMTS15Q8TE58 950 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 DIO2Q92813 273 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 SPDL1Q96EA4 605 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 SLC35A4Q96G79 324 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 C16orf58Q96GQ5 468 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 COL21A1Q96P44 957 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 STACQ99469 402 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 FAM173AQ9BQD7 235 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 PIGUQ9H490 435 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 SH2D2AQ9NP31 389 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 DUSP22Q9NRW4 184 aa13.12□□□□□ -0.31
CTSA-219ENST00000607841 CHCHD2Q9Y6H1 151 aaPredicted RBP13.12□□□□□ -0.31
CTSA-219ENST00000607841 TNRC6AQ8NDV7 1962 aaKnown RBP13.12□□□□□ -0.31
CTSA-219ENST00000607841 BOD1L1Q8NFC6 3051 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 CPAMD8Q8IZJ3 1885 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 ANKRD33BA6NCL7 494 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 ASPDHA6ND91 283 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 NR5A2O00482 541 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 HS6ST1O60243 411 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 TSPAN2O60636 221 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 SNX4O95219 450 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 CCL3P10147 92 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 MATN1P21941 496 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 CHI3L1P36222 383 aaPredicted RBP13.11□□□□□ -0.31
CTSA-219ENST00000607841 PIGAP37287 484 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 ZFP36L2P47974 494 aaKnown RBP13.11□□□□□ -0.31
CTSA-219ENST00000607841 TRPC1P48995 793 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 MEOX1P50221 254 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 SEC24CP53992 1094 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 TLE1Q04724 770 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms