RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 ENDOUP21128 410 aaKnown RBP13.12□□□□□ -0.31
PRDM16-210ENST00000607632 BGNP21810 368 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 RPL3P39023 403 aaKnown RBP13.12□□□□□ -0.31
PRDM16-210ENST00000607632 SLC1A6P48664 564 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 PNLIPRP2P54317 469 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 CORO7P57737 925 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 CASP8Q14790 479 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 SLC10A1Q14973 349 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 EXOSC6Q5RKV6 272 aaKnown RBP13.12□□□□□ -0.31
PRDM16-210ENST00000607632 BICRALQ6AI39 1079 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 DESI1Q6ICB0 168 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 SLC30A6Q6NXT4 461 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 TMEM107Q6UX40 140 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 R3HCC1LQ7Z5L2 792 aaKnown RBP13.12□□□□□ -0.31
PRDM16-210ENST00000607632 RIMKLAQ8IXN7 391 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 OR5M3Q8NGP4 307 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 PPP1R14CQ8TAE6 165 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 GFM2Q969S9 779 aaKnown RBP13.12□□□□□ -0.31
PRDM16-210ENST00000607632 PPCDCQ96CD2 204 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 ZBED6CLQ96FA7 236 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-210ENST00000607632 LMF2Q9BU23 707 aaKnown RBP13.12□□□□□ -0.31
PRDM16-210ENST00000607632 KCNK9Q9NPC2 374 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 PCDHGB3Q9Y5G1 929 aa13.12□□□□□ -0.31
PRDM16-210ENST00000607632 PHF3Q92576 2039 aaKnown RBP13.12□□□□□ -0.31
PRDM16-210ENST00000607632 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 A1L4Q6 167 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 TTC36A6NLP5 189 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 SCAMP2O15127 329 aaKnown RBP13.11□□□□□ -0.31
PRDM16-210ENST00000607632 NME6O75414 186 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-210ENST00000607632 LRATO95237 230 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
PRDM16-210ENST00000607632 RPL14P50914 215 aaKnown RBP13.11□□□□□ -0.31
PRDM16-210ENST00000607632 EMX2Q04743 252 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 BST1Q10588 318 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 STX3Q13277 289 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 ART3Q13508 389 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 CYP27C1Q4G0S4 372 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 TMEM198Q66K66 360 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 TIGD3Q6B0B8 471 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 ANKRD26P1Q6NSI1 321 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 XKRXQ6PP77 449 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 ZNF551Q7Z340 670 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-210ENST00000607632 CAMKMTQ7Z624 323 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 CD163Q86VB7 1156 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 EID3Q8N140 333 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 LIX1Q8N485 282 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 CLHC1Q8NHS4 586 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 ZFP28Q8NHY6 868 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 PSMA8Q8TAA3 256 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 RAB3IL1Q8TBN0 382 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 TMBIM1Q969X1 311 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 CIDECQ96AQ7 238 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-210ENST00000607632 COQ8BQ96D53 544 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 GIMAP5Q96F15 307 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 COL21A1Q96P44 957 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 DDX18Q9NVP1 670 aaKnown RBP13.11□□□□□ -0.31
PRDM16-210ENST00000607632 C15orf41Q9Y2V0 281 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 KLF2Q9Y5W3 355 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-210ENST00000607632 PCNX1Q96RV3 2341 aa13.11□□□□□ -0.31
PRDM16-210ENST00000607632 TRGV5A0A0B4J1U4 118 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 BCKDKO14874 412 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 SNPHO15079 494 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 AKAP10O43572 662 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 ICOSLGO75144 302 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 SNNO75324 88 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-210ENST00000607632 PDE9AO76083 593 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 HPNP05981 417 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 TPOP07202 933 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 DDX5P17844 614 aaKnown RBP13.1□□□□□ -0.31
PRDM16-210ENST00000607632 PTPN6P29350 595 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 HPCAL1P37235 193 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 CDK9P50750 372 aaKnown RBP13.1□□□□□ -0.31
PRDM16-210ENST00000607632 GAS1P54826 345 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 MAGOHP61326 146 aaKnown RBP13.1□□□□□ -0.31
PRDM16-210ENST00000607632 MAD2L1Q13257 205 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-210ENST00000607632 EFR3AQ14156 821 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 PTGR1Q14914 329 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 AGBL2Q5U5Z8 902 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 IL23RQ5VWK5 629 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 MRGPRGQ86SM5 289 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 PACS2Q86VP3 889 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 NATD1Q8N6N6 113 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 FNDC5Q8NAU1 212 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 NEIL3Q8TAT5 605 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 TUBGCP3Q96CW5 907 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 OSBPL11Q9BXB4 747 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 TP63Q9H3D4 680 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-210ENST00000607632 SIRT3Q9NTG7 399 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-210ENST00000607632 SH3BP4Q9P0V3 963 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 B4GALT7Q9UBV7 327 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 SH3BGRL2Q9UJC5 107 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 FREM3P0C091 2139 aa13.1□□□□□ -0.31
PRDM16-210ENST00000607632 PRAMEF25A6NGN4 478 aa13.09□□□□□ -0.31
PRDM16-210ENST00000607632 REM1O75628 298 aa13.09□□□□□ -0.31
PRDM16-210ENST00000607632 NKX2-2O95096 273 aa13.09□□□□□ -0.31
PRDM16-210ENST00000607632 ESRRAP11474 423 aaPredicted RBP13.09□□□□□ -0.31
PRDM16-210ENST00000607632 PRPS1L1P21108 318 aa13.09□□□□□ -0.31
PRDM16-210ENST00000607632 MAN2A2P49641 1150 aa13.09□□□□□ -0.31
PRDM16-210ENST00000607632 CLDN8P56748 225 aa13.09□□□□□ -0.31
PRDM16-210ENST00000607632 ZNF155Q12901 538 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms