RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 C3orf18Q9UK00 162 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 NXT1Q9UKK6 140 aaKnown RBP11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ABCG2Q9UNQ0 655 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 FAM32AQ9Y421 112 aaKnown RBP11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 AP4B1Q9Y6B7 739 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 R4GN57 208 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 LAMA1P25391 3075 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 VSTM2BA6NLU5 285 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 OR6C76A6NM76 312 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CBFA2T3O75081 653 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 LGI1O95970 557 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 OPN1SWP03999 348 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DBIP07108 87 aaKnown RBP11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CD63P08962 238 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CDH2P19022 906 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TRHRP34981 398 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 OR1D4P47884 311 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 RAD23AP54725 363 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PSMD4P55036 377 aaKnown RBP11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 RAB15P59190 212 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DCAF7P61962 342 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 POU6F2P78424 691 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 BTG2P78543 158 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DCDP81605 110 aaKnown RBP11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 OCA2Q04671 838 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ZNF155Q12901 538 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CSRP2Q16527 193 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 NRF1Q16656 503 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DUSP7Q16829 419 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 RPS26P11Q5JNZ5 115 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DCST2Q5T1A1 773 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PHF19Q5T6S3 580 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 RNF220Q5VTB9 566 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TCEAL6Q6IPX3 200 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 COX15Q7KZN9 410 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TSEN54Q7Z6J9 526 aaKnown RBP11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 GALNT10Q86SR1 603 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 NAXDQ8IW45 347 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ZNF619Q8N2I2 560 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 GALNT4Q8N4A0 578 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 LINC00471Q8N535 108 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ZNF615Q8N8J6 731 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 COX18Q8N8Q8 333 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 MORN4Q8NDC4 146 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 C17orf47Q8NEP4 570 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TOR1AIP2Q8NFQ8 470 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 GPR32P1Q8NGA4 272 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SLC9A6Q92581 669 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TFAP2CQ92754 450 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CDS1Q92903 461 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TCEAL3Q969E4 200 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PTCHD1Q96NR3 888 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SLC46A1Q96NT5 459 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 G6PC3Q9BUM1 346 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 FAM117AQ9C073 453 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ANKRD19PQ9H560 264 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ARMC7Q9H6L4 198 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 WDR54Q9H977 334 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 FOLH1BQ9HBA9 442 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 NECTIN3Q9NQS3 549 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 KLHL28Q9NXS3 571 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ENOPH1Q9UHY7 261 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ZNF232Q9UNY5 417 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SAMHD1Q9Y3Z3 626 aaKnown RBP11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 WDR45Q9Y484 360 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PCDHGA10Q9Y5H3 936 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ORC6Q9Y5N6 252 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 MAU2Q9Y6X3 613 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 VCANP13611 3396 aa11.44□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 C7orf72A4D263 438 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 AGAP5A6NIR3 686 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 hCG_2039718K7EN88 272 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DLGAP1O14490 977 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 HYAL3O43820 417 aaPredicted RBP11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 BRINP1O60477 761 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 OXSR1O95747 527 aaPredicted RBP11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 RECKO95980 971 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 IGKV3-11P04433 115 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 THRBP10828 461 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 MAOAP21397 527 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 AGXTP21549 392 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 LIMS1P48059 325 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PDX1P52945 283 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PSG6Q00889 435 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 MERTKQ12866 999 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 EIF3IQ13347 325 aaKnown RBP11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 IL18R1Q13478 541 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PUM1Q14671 1186 aaKnown RBP eCLIP11.43□□□□□ -0.582e-9■■□□□ 12.1
NEDD8-MDP1-203ENST00000604306 LARS2Q15031 903 aaKnown RBP11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SLC36A3Q495N2 470 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 NKAIN1Q4KMZ8 207 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 LIN52Q52LA3 116 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 MLIPQ5VWP3 458 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TYW3Q6IPR3 259 aaKnown RBP11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PWWP2BQ6NUJ5 590 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 OVCH1Q7RTY7 1134 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 GLRX5Q86SX6 157 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 STK32CQ86UX6 486 aa11.43□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CARM1Q86X55 608 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms