RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	NRG3	P56975	720 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	C21orf58	P58505	322 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	SRSF11	Q05519	484 aa	Known RBP	18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	KPNB1	Q14974	876 aa	Known RBP	18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	PLEKHN1	Q494U1	663 aa	Predicted RBP	18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	ZNF766	Q5HY98	468 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	AAGAB	Q6PD74	315 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	OPN5	Q6U736	354 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	TMEM64	Q6YI46	380 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808		Q6ZS92	163 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	VPS37A	Q8NEZ2	397 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	OR5M3	Q8NGP4	307 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	OR5P2	Q8WZ92	322 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	COQ8B	Q96D53	544 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	TEX37	Q96LM6	180 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	CLMP	Q9H6B4	373 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	FOLH1B	Q9HBA9	442 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	C3orf14	Q9HBI5	128 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	PCDHGB4	Q9UN71	923 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	CNTRL	Q7Z7A1	2325 aa		18.58	■□□□□ 0.57
IRF3-221	ENST00000598808	NR5A2	O00482	541 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	FBP2	O00757	339 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	ANKRD28	O15084	1053 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	SLC25A12	O75746	678 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	CPSF4	O95639	269 aa	Known RBP	18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	EMD	P50402	254 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	MAPKAPK3	Q16644	382 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	DPY19L1	Q2PZI1	675 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	PIGG	Q5H8A4	983 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	CLECL1	Q8IZS7	167 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	OR4A15	Q8NGL6	344 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	TESC	Q96BS2	214 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	SPDL1	Q96EA4	605 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	HES7	Q9BYE0	225 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	NXF5	Q9H1B4	397 aa	Known RBP	18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	SPAG4	Q9NPE6	437 aa		18.58	■□□□□ 0.56
IRF3-221	ENST00000598808	ZNF462	Q96JM2	2506 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808		A0A087WV62	115 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	UPK1A	O00322	258 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	PLOD2	O00469	737 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	ERN1	O75460	977 aa	Known RBP	18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	SOX18	P35713	384 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	FRK	P42685	505 aa	Predicted RBP	18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	POLR2J	P52435	117 aa	Known RBP	18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	DGKQ	P52824	942 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	PSME3	P61289	254 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	PRR5	P85299	388 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	TP53BP2	Q13625	1128 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	ZNHIT3	Q15649	155 aa	Predicted RBP	18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	FHL5	Q5TD97	284 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	ANXA8L1	Q5VT79	327 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	C8orf82	Q6P1X6	216 aa	Predicted RBP	18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	WDR53	Q7Z5U6	358 aa	Predicted RBP	18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	CAMKMT	Q7Z624	323 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	ARMC10	Q8N2F6	343 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	OR2L13	Q8N349	312 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	NUP43	Q8NFH3	380 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	FBXO30	Q8TB52	745 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	LCOR	Q96JN0	433 aa	Predicted RBP	18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	CDRT15	Q96T59	188 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	NEUROD4	Q9HD90	331 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	ZCCHC3	Q9NUD5	404 aa	Known RBP	18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	LEF1	Q9UJU2	399 aa	Predicted RBP	18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	C19orf53	Q9UNZ5	99 aa	Predicted RBP	18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	OR10H1	Q9Y4A9	318 aa		18.57	■□□□□ 0.56
IRF3-221	ENST00000598808	EMC8	O43402	210 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	ENTPD5	O75356	428 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	ME2	P23368	584 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	TRHR	P34981	398 aa	Predicted RBP	18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	PLCXD2	Q0VAA5	305 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	C19orf57	Q0VDD7	668 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	SAMD4B	Q5PRF9	694 aa	Known RBP	18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	TMEM178A	Q8NBL3	297 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	OR8J2	Q8NGG1	315 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	OR9I1	Q8NGQ6	314 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	OR5AK3P	Q8NH89	298 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	WDR60	Q8WVS4	1066 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	ADIPOR1	Q96A54	375 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	TP53INP1	Q96A56	240 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	CLPTM1L	Q96KA5	538 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	MS4A4E	Q96PG1	132 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	TIMMDC1	Q9NPL8	285 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	SLC52A3	Q9NQ40	469 aa		18.56	■□□□□ 0.56
IRF3-221	ENST00000598808	C15orf38-AP3S2	A0A0A6YYH1	394 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	CCDC154	A6NI56	674 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808		B8ZZF3	427 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	SLC28A2	O43868	658 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	ZNF354A	O60765	605 aa	Predicted RBP	18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	NEURL1	O76050	574 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	IL12A	P29459	219 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	KRT20	P35900	424 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	DCAF7	P61962	342 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	MLC1	Q15049	377 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	SLC25A25	Q6KCM7	469 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	ARPIN	Q7Z6K5	226 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	SLC44A2	Q8IWA5	706 aa	Predicted RBP	18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	GPALPP1	Q8IXQ4	340 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	SLC15A4	Q8N697	577 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	ZNF441	Q8N8Z8	693 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	MDS2	Q8NDY4	140 aa		18.55	■□□□□ 0.56

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