RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 FAM111BQ6SJ93 734 aa15.44■□□□□ 0.06
PNKP-210ENST00000597965 P4HA3Q7Z4N8 544 aa15.44■□□□□ 0.06
PNKP-210ENST00000597965 OR52R1Q8NGF1 315 aa15.44■□□□□ 0.06
PNKP-210ENST00000597965 SLC44A1Q8WWI5 657 aa15.44■□□□□ 0.06
PNKP-210ENST00000597965 SELENOMQ8WWX9 145 aa15.44■□□□□ 0.06
PNKP-210ENST00000597965 MRRFQ96E11 262 aaKnown RBP15.44■□□□□ 0.06
PNKP-210ENST00000597965 SLC35A4Q96G79 324 aa15.44■□□□□ 0.06
PNKP-210ENST00000597965 SFXN2Q96NB2 322 aa15.44■□□□□ 0.06
PNKP-210ENST00000597965 SHCBP1LQ9BZQ2 653 aa15.44■□□□□ 0.06
PNKP-210ENST00000597965 DKKL1Q9UK85 242 aa15.44■□□□□ 0.06
PNKP-210ENST00000597965 HMX2A2RU54 273 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 PLOD2O00469 737 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 SMPD2O60906 423 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 REM1O75628 298 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 HEXAP06865 529 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 CNTFP26441 200 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 IL12BP29460 328 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 CPOXP36551 454 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 ALDH9A1P49189 494 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 EMDP50402 254 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 LHX2P50458 406 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 C2orf54Q08AI8 447 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 TRAF3Q13114 568 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 POU4F3Q15319 338 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 SGO1Q5FBB7 561 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 PRSS57Q6UWY2 283 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 GCNT2Q8N0V5 402 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 OR4F6Q8NGB9 312 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 RDH11Q8TC12 318 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 ZNF675Q8TD23 568 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 TMBIM1Q969X1 311 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 TM4SF18Q96CE8 201 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 BTBD9Q96Q07 612 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 SLC39A3Q9BRY0 314 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 TSPYL1Q9H0U9 437 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 PFDN4Q9NQP4 134 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 GIMAP4Q9NUV9 329 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 ELOVL5Q9NYP7 299 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 VPS29Q9UBQ0 182 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 UTS2RQ9UKP6 389 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 GPR55Q9Y2T6 319 aaPredicted RBP15.43■□□□□ 0.06
PNKP-210ENST00000597965 TESMINQ9Y4I5 508 aa15.43■□□□□ 0.06
PNKP-210ENST00000597965 C2orf72A6NCS6 295 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 LINC01387J3KSC0 135 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 ESRRBO95718 433 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 CBX7O95931 251 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 INHBAP08476 426 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 PEPDP12955 493 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 HSD3B1P14060 373 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 ZNF708P17019 499 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 HSD3B2P26439 372 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 SOX18P35713 384 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 MC3RP41968 323 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 SERPINB9P50453 376 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 GALNT1Q10472 559 aaPredicted RBP15.42■□□□□ 0.06
PNKP-210ENST00000597965 TRMT12Q53H54 448 aaKnown RBP15.42■□□□□ 0.06
PNKP-210ENST00000597965 ZDHHC24Q6UX98 284 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 MED12LQ86YW9 2145 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 MMGT1Q8N4V1 131 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 NOA1Q8NC60 698 aaKnown RBP15.42■□□□□ 0.06
PNKP-210ENST00000597965 CNRIP1Q96F85 164 aaPredicted RBP15.42■□□□□ 0.06
PNKP-210ENST00000597965 MRPL57Q9BQC6 102 aaKnown RBP15.42■□□□□ 0.06
PNKP-210ENST00000597965 BDH2Q9BUT1 245 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 STMN4Q9H169 189 aaPredicted RBP15.42■□□□□ 0.06
PNKP-210ENST00000597965 ACSS3Q9H6R3 686 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 ZBTB26Q9HCK0 441 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 SDHAF3Q9NRP4 125 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 EHD3Q9NZN3 535 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 XPR1Q9UBH6 696 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 VPS13CQ709C8 3753 aa15.42■□□□□ 0.06
PNKP-210ENST00000597965 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 A0A1W2PNV4 684 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 HCRTR2O43614 444 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 TNFSF13O75888 250 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 SMNDC1O75940 238 aaKnown RBP eCLIP15.41■□□□□ 0.06
PNKP-210ENST00000597965 PDYNP01213 254 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 KRT6AP02538 564 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 KRT6BP04259 564 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 DPP4P27487 766 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 KRT6CP48668 564 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 PNLIPRP2P54317 469 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 DSCR4P56555 118 aaPredicted RBP15.41■□□□□ 0.06
PNKP-210ENST00000597965 CLDN18P56856 261 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 HEPACAMQ14CZ8 416 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 MEIOBQ8N635 442 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 ADOQ96SZ5 270 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 MED18Q9BUE0 208 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 MRPL46Q9H2W6 279 aaKnown RBP15.41■□□□□ 0.06
PNKP-210ENST00000597965 TAS2R9Q9NYW1 312 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 SENP1Q9P0U3 644 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 TRPS1Q9UHF7 1281 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 MCM8Q9UJA3 840 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 MED12Q93074 2177 aa15.41■□□□□ 0.06
PNKP-210ENST00000597965 SLC22A20A6NK97 555 aa15.4■□□□□ 0.06
PNKP-210ENST00000597965 PCSK2P16519 638 aa15.4■□□□□ 0.06
PNKP-210ENST00000597965 GRK2P25098 689 aa15.4■□□□□ 0.06
PNKP-210ENST00000597965 MPIP34949 423 aa15.4■□□□□ 0.06
PNKP-210ENST00000597965 CD79BP40259 229 aa15.4■□□□□ 0.06
PNKP-210ENST00000597965 GSTM5P46439 218 aa15.4■□□□□ 0.06
PNKP-210ENST00000597965 STARP49675 285 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms