RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 MIB2Q96AX9 1013 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 RILPQ96NA2 401 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 Q9N2J8 555 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 SDR39U1Q9NRG7 319 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 OLAHQ9NV23 265 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 CNIH4Q9P003 139 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 RP1L1Q8IWN7 2480 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 A0A0G2JND7 137 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 PRSS51A0A1B0GVH4 220 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 G3V3Y1 287 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 CNR1P21554 472 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 IL12BP29460 328 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 PRIM2P49643 509 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 PHC1P78364 1004 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 PSG6Q00889 435 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 TP53BP2Q13625 1128 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 IGFBP7Q16270 282 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 VPS26BQ4G0F5 336 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 PRAMEF20Q5VT98 475 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 ATCAYQ86WG3 371 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 CDRT4Q8N9R6 151 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 POGLUT1Q8NBL1 392 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 PAQR8Q8TEZ7 354 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 STON2Q8WXE9 905 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 SLC9A6Q92581 669 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 DIO2Q92813 273 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 MOAP1Q96BY2 351 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 FRMD6Q96NE9 622 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 OR52E6Q96RD3 313 aa18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 LMF2Q9BU23 707 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-214ENST00000597396 PRRC2CQ9Y520 2896 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 ASPDHA6ND91 283 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 PGRP06401 933 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 FOXK1P85037 733 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 ALDH6A1Q02252 535 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 PLGLB1Q02325 96 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 MFSD12Q6NUT3 480 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 PAOXQ6QHF9 649 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 GK5Q6ZS86 529 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 NUP54Q7Z3B4 507 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 FBXW8Q8N3Y1 598 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 OR2M7Q8NG81 312 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 OR9I1Q8NGQ6 314 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 OR5AK3PQ8NH89 298 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 FBXO30Q8TB52 745 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 GPR151Q8TDV0 419 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 NR4A3Q92570 626 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 JADE3Q92613 823 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 GIMAP5Q96F15 307 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 CHMP6Q96FZ7 201 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 FAM173AQ9BQD7 235 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 SH2D2AQ9NP31 389 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 DEPPQ9NTK1 212 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 CBLCQ9ULV8 474 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 VPS4AQ9UN37 437 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 CHCHD2Q9Y6H1 151 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 FREM3P0C091 2139 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 ESPL1Q14674 2120 aa18.08■□□□□ 0.48
SHKBP1-214ENST00000597396 A0A0G2JMM0 328 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 A0A1W2PPB8 328 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 A0A1W2PRS3 328 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 KIR3DP1A8MWS1 328 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 SCN2BO60939 215 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 IL6P05231 212 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 ALOX5P09917 674 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 ZNF24P17028 368 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 NCF2P19878 526 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 GABRA3P34903 492 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 PIGAP37287 484 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 RFC3P40938 356 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 DNASE1L1P49184 302 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 POLR2JP52435 117 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 KCNJ2P63252 427 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 GAB1Q13480 694 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 LASP1Q14847 261 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 DECR1Q16698 335 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 CYP27C1Q4G0S4 372 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 ZCCHC12Q6PEW1 402 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 BHLHB9Q6PI77 547 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 OR4N2Q8NGD1 307 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 SPPL2AQ8TCT8 520 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 COL21A1Q96P44 957 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 SECISBP2Q96T21 854 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 YIPF4Q9BSR8 244 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 TMEM120AQ9BXJ8 343 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 BTNL2Q9UIR0 455 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 MRTO4Q9UKD2 239 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 CNOT11Q9UKZ1 510 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 FAF1Q9UNN5 650 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 TRIM33Q9UPN9 1127 aa18.07■□□□□ 0.48
SHKBP1-214ENST00000597396 NCKAP5O14513 1909 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 RNF103-CHMP3A0A140T963 221 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 FAM234BA2RU67 622 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 OR6C70A6NIJ9 312 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 ABCB7O75027 752 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 UGT2B11O75310 529 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 NKX2-2O95096 273 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 HMGN2P05204 90 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 KRT16P08779 473 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms