RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ANKRD10Q9NXR5 420 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 LUZP4Q9P127 313 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 C19orf53Q9UNZ5 99 aaPredicted RBP13.88□□□□□ -0.19
TRIM28-207ENST00000597136 PCDHGB7Q9Y5F8 929 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 GMEB1Q9Y692 573 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 CLIC1O00299 241 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 ZFAND5O76080 213 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 CHI3L1P36222 383 aaPredicted RBP13.88□□□□□ -0.19
TRIM28-207ENST00000597136 MLF1P58340 268 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 AP2B1P63010 937 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 FUT7Q11130 342 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 SELPLGQ14242 412 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 MEP1AQ16819 746 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 PLEKHN1Q494U1 663 aaPredicted RBP13.88□□□□□ -0.19
TRIM28-207ENST00000597136 RABL3Q5HYI8 236 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 C6orf163Q5TEZ5 329 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 ABHD17BQ5VST6 288 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 SAXO2Q658L1 398 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 ASRGL1Q7L266 308 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 ZNF615Q8N8J6 731 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 OR8J3Q8NGG0 315 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 TMEM125Q96AQ2 219 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 MOAP1Q96BY2 351 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 NEURL3Q96EH8 262 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 IKZF5Q9H5V7 419 aa13.88□□□□□ -0.19
TRIM28-207ENST00000597136 ZCCHC3Q9NUD5 404 aaKnown RBP13.88□□□□□ -0.19
TRIM28-207ENST00000597136 DDX18Q9NVP1 670 aaKnown RBP13.88□□□□□ -0.19
TRIM28-207ENST00000597136 C15orf38-AP3S2A0A0A6YYH1 394 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 WWP2O00308 870 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 DYRK3O43781 588 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 CBX7O95931 251 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 PPIBP23284 216 aaKnown RBP13.87□□□□□ -0.19
TRIM28-207ENST00000597136 SLC7A2P52569 658 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 MTPNP58546 118 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 PRR5P85299 388 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 TP53BP2Q13625 1128 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 ESPL1Q14674 2120 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 DNAL1Q4LDG9 190 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 BHLHB9Q6PI77 547 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 C6orf120Q7Z4R8 191 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 ARPINQ7Z6K5 226 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 SLC15A3Q8IY34 581 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 ARMC10Q8N2F6 343 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 ZNF843Q8N446 348 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 ZADH2Q8N4Q0 377 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 SLC5A8Q8N695 610 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 NUP43Q8NFH3 380 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 OR56A1Q8NGH5 318 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 PNPT1Q8TCS8 783 aaKnown RBP13.87□□□□□ -0.19
TRIM28-207ENST00000597136 HAS2Q92819 552 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 CDRT15Q96T59 188 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 SH3GL1Q99961 368 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 THUMPD3Q9BV44 507 aaKnown RBP13.87□□□□□ -0.19
TRIM28-207ENST00000597136 OR10A5Q9H207 317 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 SPAG4Q9NPE6 437 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 GPATCH2Q9NW75 528 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 CMTM6Q9NX76 183 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 TMEM181Q9P2C4 612 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 COPS7AQ9UBW8 275 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 DTX4Q9Y2E6 619 aa13.87□□□□□ -0.19
TRIM28-207ENST00000597136 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 EVPLLA8MZ36 301 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 ITGA10O75578 1167 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 OR2J2O76002 312 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 PSMG1O95456 288 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 KRT75O95678 551 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 CD96P40200 585 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 MVDP53602 400 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 PRKAG1P54619 331 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 RNF111Q6ZNA4 994 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 SZRD1Q7Z422 152 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 TEX19Q8NA77 164 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 GIMAP5Q96F15 307 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 ART5Q96L15 291 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 SIGLEC12Q96PQ1 595 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 KAT8Q9H7Z6 458 aaKnown RBP13.86□□□□□ -0.19
TRIM28-207ENST00000597136 MYOTQ9UBF9 498 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 ABCD2Q9UBJ2 740 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 BCAP29Q9UHQ4 241 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 TEKT2Q9UIF3 430 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 L3MBTL1Q9Y468 752 aa13.86□□□□□ -0.19
TRIM28-207ENST00000597136 MED12Q93074 2177 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 NME4O00746 187 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 GSC2O15499 205 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 DPM1O60762 260 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 DNAJC8O75937 253 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-207ENST00000597136 HMGN2P05204 90 aaKnown RBP13.85□□□□□ -0.19
TRIM28-207ENST00000597136 GPX2P18283 190 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 ARG2P78540 354 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 RGNQ15493 299 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 COX20Q5RI15 118 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRIM28-207ENST00000597136 SLC6A19Q695T7 634 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 ANGPTL8Q6UXH0 198 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 BNC2Q6ZN30 1099 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-207ENST00000597136 ZNF771Q7L3S4 317 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-207ENST00000597136 ZNF227Q86WZ6 799 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 RNF130Q86XS8 419 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 Q8NA96 180 aa13.85□□□□□ -0.19
TRIM28-207ENST00000597136 OR7G1Q8NGA0 311 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms