RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 CTHRC1Q96CG8 243 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 CNRIP1Q96F85 164 aaPredicted RBP9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 FAM111AQ96PZ2 611 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 UCN2Q96RP3 112 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 ADOQ96SZ5 270 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 C6orf203Q9P0P8 240 aaPredicted RBP9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 CLCF1Q9UBD9 225 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 DKKL1Q9UK85 242 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 FBXL2Q9UKC9 423 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 UTS2RQ9UKP6 389 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 PACSIN3Q9UKS6 424 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 SNX6Q9UNH7 406 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 WIF1Q9Y5W5 379 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 NUP214P35658 2090 aaPredicted RBP9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 RAI1Q7Z5J4 1906 aaPredicted RBP9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 PPP6CO00743 305 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 TO15178 435 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 SMPD2O60906 423 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 ABCB7O75027 752 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 OR4F21O95013 312 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 TGM6O95932 706 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 OTCP00480 354 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 INHBAP08476 426 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 DPP4P27487 766 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 IL12BP29460 328 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 LHX2P50458 406 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 CLDN18P56856 261 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 TRA2BP62995 288 aaKnown RBP9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 FAM27E3Q08E93 113 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 EFR3AQ14156 821 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 TSNAXIP1Q2TAA8 658 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 TEX35Q5T0J7 233 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 LARP4Q71RC2 724 aaKnown RBP eCLIP9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 UBQLNLQ8IYU4 475 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 C1orf52Q8N6N3 182 aaKnown RBP9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 CNEP1R1Q8N9A8 125 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 OR4K17Q8NGC6 315 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 KAT2AQ92830 837 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 HBEGFQ99075 208 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 LRRC1Q9BTT6 524 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 G6PC3Q9BUM1 346 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 ANKRA2Q9H9E1 313 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 BRF2Q9HAW0 419 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 HEY2Q9UBP5 337 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 DLGAP4Q9Y2H0 992 aa9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 GPR55Q9Y2T6 319 aaPredicted RBP9.57□□□□□ -0.88
CHMP2A-202ENST00000596708 FREM1Q5H8C1 2179 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 A0A1B0GTL3 188 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 A0A1W2PNV4 684 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 FAM171A2A8MVW0 826 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 MSTNO14793 375 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 TSPAN2O60636 221 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 NME6O75414 186 aaPredicted RBP9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 TNFSF13O75888 250 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 RPS17P08708 135 aaKnown RBP9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 PEPDP12955 493 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 ZNF708P17019 499 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 GRK2P25098 689 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 PNLIPRP2P54317 469 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 SIRPAP78324 504 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 ERCC6LQ2NKX8 1250 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 ZNF628Q5EBL2 1059 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 Q5PR19 223 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 FAM219BQ5XKK7 198 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 OR2A2Q6IF42 318 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 LETMD1Q6P1Q0 360 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 VWA1Q6PCB0 445 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 CXorf67Q86X51 503 aaPredicted RBP9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 KRTAP1-3Q8IUG1 177 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 PIAS4Q8N2W9 510 aaPredicted RBP9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 MEIOBQ8N635 442 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 OR9A2Q8NGT5 310 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 ZNF675Q8TD23 568 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 ZNF483Q8TF39 744 aaPredicted RBP9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 ZNF592Q92610 1267 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 ANP32BQ92688 251 aaKnown RBP9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 PIGTQ969N2 578 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 EXOSC8Q96B26 276 aaKnown RBP9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 EFHD2Q96C19 240 aaPredicted RBP9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 STARD4Q96DR4 205 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 PIK3IP1Q96FE7 263 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 PGM2Q96G03 612 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 SLC35A4Q96G79 324 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 ZNF681Q96N22 645 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 WFIKKN1Q96NZ8 548 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 MRPL57Q9BQC6 102 aaKnown RBP9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 ACSS3Q9H6R3 686 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 UBTD1Q9HAC8 227 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 GIMAP4Q9NUV9 329 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 KLHL28Q9NXS3 571 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 ZNF226Q9NYT6 803 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 NINJ2Q9NZG7 142 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 PPP4R1LQ9P1A2 415 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 VPS29Q9UBQ0 182 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 TRPS1Q9UHF7 1281 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 MCM8Q9UJA3 840 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 MRPS18CQ9Y3D5 142 aaKnown RBP9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 TESMINQ9Y4I5 508 aa9.56□□□□□ -0.88
CHMP2A-202ENST00000596708 NF1P21359 2839 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms