RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 NAGAP17050 411 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 GPC1P35052 558 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 SSR4P51571 173 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 PRKAG1P54619 331 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 CASP9P55211 416 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 STX1BP61266 288 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 DCAF7P61962 342 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 RPS26P62854 115 aaKnown RBP9.73□□□□□ -0.85
LIG1-210ENST00000596332 LASP1Q14847 261 aaKnown RBP9.73□□□□□ -0.85
LIG1-210ENST00000596332 NTRK2Q16620 822 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 MAPKAPK3Q16644 382 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 LACTB2Q53H82 288 aaPredicted RBP9.73□□□□□ -0.85
LIG1-210ENST00000596332 SLC6A19Q695T7 634 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 CDC73Q6P1J9 531 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 ZCCHC12Q6PEW1 402 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 IL20RBQ6UXL0 311 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 SLC29A4Q7RTT9 530 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 OLIG3Q7RTU3 272 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 SLC44A2Q8IWA5 706 aaPredicted RBP9.73□□□□□ -0.85
LIG1-210ENST00000596332 SLC39A7Q92504 469 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 PIK3R3Q92569 461 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 SPACA9Q96E40 222 aaPredicted RBP9.73□□□□□ -0.85
LIG1-210ENST00000596332 HSPBAP1Q96EW2 488 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 PANX1Q96RD7 426 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 GAL3ST4Q96RP7 486 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 ZBTB18Q99592 522 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 BARD1Q99728 777 aaKnown RBP9.73□□□□□ -0.85
LIG1-210ENST00000596332 ARHGAP9Q9BRR9 750 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 MFRPQ9BY79 579 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 PIGUQ9H490 435 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 C3orf14Q9HBI5 128 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 NEUROD4Q9HD90 331 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 EQTNQ9NQ60 294 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.73□□□□□ -0.85
LIG1-210ENST00000596332 GIN1Q9NXP7 522 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 FLRT3Q9NZU0 649 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 PRODH2Q9UF12 536 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 CNOT11Q9UKZ1 510 aaKnown RBP9.73□□□□□ -0.85
LIG1-210ENST00000596332 NTNG1Q9Y2I2 539 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 SNX8Q9Y5X2 465 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 A0A096LPI6 279 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 LOC100653049A0A140TA62 436 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 C17orf51A8MQB3 221 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 HMGN4O00479 90 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 RFXANKO14593 260 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 SLC22A2O15244 555 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 ACOX3O15254 700 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 COQ9O75208 318 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 UGT2B11O75310 529 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 PPM1BO75688 479 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 KRT34O76011 436 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 SNRPB2P08579 225 aaKnown RBP9.72□□□□□ -0.85
LIG1-210ENST00000596332 CCL3P10147 92 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 DDX5P17844 614 aaKnown RBP9.72□□□□□ -0.85
LIG1-210ENST00000596332 GABRA3P34903 492 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 PIGAP37287 484 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 GZMMP51124 257 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 GAS1P54826 345 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 FBXW4P57775 412 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 KCNK10P57789 538 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 LRRC74AQ0VAA2 488 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 FOXO1Q12778 655 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 SELPLGQ14242 412 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 OR1C1Q15619 314 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 CYP27C1Q4G0S4 372 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 RUNDC3AQ59EK9 446 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 FNDC7Q5VTL7 733 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 FAM91A1Q658Y4 838 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 BICRALQ6AI39 1079 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 HEPHL1Q6MZM0 1159 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 C8orf82Q6P1X6 216 aaPredicted RBP9.72□□□□□ -0.85
LIG1-210ENST00000596332 APOOLQ6UXV4 268 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 ZNF621Q6ZSS3 439 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 PTRH1Q86Y79 214 aaKnown RBP9.72□□□□□ -0.85
LIG1-210ENST00000596332 FITM2Q8N6M3 262 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 HORMAD2Q8N7B1 307 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 BCORP1Q8N888 145 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 CDRT4Q8N9R6 151 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 VPS37AQ8NEZ2 397 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 OR10G3Q8NGC4 313 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 OR56A1Q8NGH5 318 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 OR5D16Q8NGK9 328 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 FBXO30Q8TB52 745 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 PAQR8Q8TEZ7 354 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 TMBIM1Q969X1 311 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 MOAP1Q96BY2 351 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 OMA1Q96E52 524 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 ITCHQ96J02 903 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 MS4A4EQ96PG1 132 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 OR7D2Q96RA2 312 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 TAAR6Q96RI8 345 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 NODALQ96S42 347 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 SLC35A5Q9BS91 424 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 ACTRT3Q9BYD9 372 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 TRIM8Q9BZR9 551 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 LRFN1Q9P244 771 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 KCNE5Q9UJ90 142 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 CFL2Q9Y281 166 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 ARL2BPQ9Y2Y0 163 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms