RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 C1orf109Q9NX04 203 aa16.4■□□□□ 0.22
HOMER3-208ENST00000595756 CES1P1Q9UKY3 287 aa16.4■□□□□ 0.22
HOMER3-208ENST00000595756 CFL2Q9Y281 166 aa16.4■□□□□ 0.22
HOMER3-208ENST00000595756 TMED5Q9Y3A6 229 aa16.4■□□□□ 0.22
HOMER3-208ENST00000595756 GNG14A0A1W2PPG7 69 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 SLCO1B7G3V0H7 640 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 PCDH7O60245 1069 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 SEC22BO75396 215 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 LYPLA1O75608 230 aaPredicted RBP16.39■□□□□ 0.21
HOMER3-208ENST00000595756 HPNP05981 417 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 S1PR1P21453 382 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 ABCD3P28288 659 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 TIA1P31483 386 aaKnown RBP eCLIP16.39■□□□□ 0.21
HOMER3-208ENST00000595756 BTKQ06187 659 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 CRYZQ08257 329 aaKnown RBP16.39■□□□□ 0.21
HOMER3-208ENST00000595756 DUSP8Q13202 625 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 PRICKLE4Q2TBC4 344 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 BICRALQ6AI39 1079 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 TMEM81Q6P7N7 255 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 TMEM64Q6YI46 380 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 AGR3Q8TD06 166 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 APIPQ96GX9 242 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 TMEM41AQ96HV5 264 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 PPP3R2Q96LZ3 170 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 LRTM1Q9HBL6 345 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 MAT2BQ9NZL9 334 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 ITGB1BP2Q9UKP3 347 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 PSME2Q9UL46 239 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 DTX4Q9Y2E6 619 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 C15orf41Q9Y2V0 281 aa16.39■□□□□ 0.21
HOMER3-208ENST00000595756 C15orf38-AP3S2A0A0A6YYH1 394 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 HSPB2A8KAH6 182 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 TMEM233B4DJY2 109 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 DYNC1I1O14576 645 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 PIP5K1BO14986 540 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 SNNO75324 88 aaPredicted RBP16.38■□□□□ 0.21
HOMER3-208ENST00000595756 ANXA4P09525 319 aaPredicted RBP16.38■□□□□ 0.21
HOMER3-208ENST00000595756 LINC00032P0C843 101 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 DRD2P14416 443 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 NAGAP17050 411 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 MASP1P48740 699 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 TRPC1P48995 793 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 CDK9P50750 372 aaKnown RBP16.38■□□□□ 0.21
HOMER3-208ENST00000595756 MAP4K2Q12851 820 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 HEPACAMQ14CZ8 416 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 HSPB2Q16082 182 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 ACSF3Q4G176 576 aaPredicted RBP16.38■□□□□ 0.21
HOMER3-208ENST00000595756 FNDC7Q5VTL7 733 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 CES4AQ5XG92 561 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 SPNS3Q6ZMD2 512 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 Q6ZSR9 355 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 PACS2Q86VP3 889 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 LIX1LQ8IVB5 337 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 ZNF781Q8N8C0 355 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 LRRC8CQ8TDW0 803 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 ZNF75CPQ92670 426 aaPredicted RBP16.38■□□□□ 0.21
HOMER3-208ENST00000595756 NTNG2Q96CW9 530 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 C11orf24Q96F05 449 aaPredicted RBP16.38■□□□□ 0.21
HOMER3-208ENST00000595756 SORT1Q99523 831 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 BRINP2Q9C0B6 783 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 C20orf27Q9GZN8 174 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 PRDM14Q9GZV8 571 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 NXF5Q9H1B4 397 aaKnown RBP16.38■□□□□ 0.21
HOMER3-208ENST00000595756 TUBB1Q9H4B7 451 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 ALKBH4Q9NXW9 302 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 ZNF639Q9UID6 485 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 L3MBTL1Q9Y468 752 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 CCL27Q9Y4X3 112 aa16.38■□□□□ 0.21
HOMER3-208ENST00000595756 HRNRQ86YZ3 2850 aaPredicted RBP16.38■□□□□ 0.21
HOMER3-208ENST00000595756 SPG11Q96JI7 2443 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 AHRRA9YTQ3 701 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 ACOX3O15254 700 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 PPM1BO75688 479 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 CSNK2A2P19784 350 aaPredicted RBP16.37■□□□□ 0.21
HOMER3-208ENST00000595756 MAPK1P28482 360 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 PEX19P40855 299 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 CASP3P42574 277 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 ZNF763Q0D2J5 394 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 MGAT2Q10469 447 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 MYBPHQ13203 477 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 ATP6AP1LQ52LC2 224 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 XKR7Q5GH72 579 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 NHSL2Q5HYW2 709 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 SEM1Q6ZVN7 128 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 WDR53Q7Z5U6 358 aaPredicted RBP16.37■□□□□ 0.21
HOMER3-208ENST00000595756 TMEM200AQ86VY9 491 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 PM20D2Q8IYS1 436 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 TM4SF18Q96CE8 201 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 CTHRC1Q96CG8 243 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 KLHL29Q96CT2 875 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 HSPBAP1Q96EW2 488 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 ITPAQ9BY32 194 aa16.37■□□□□ 0.21
HOMER3-208ENST00000595756 LSM1O15116 133 aaKnown RBP16.36■□□□□ 0.21
HOMER3-208ENST00000595756 SKAP2O75563 359 aaPredicted RBP16.36■□□□□ 0.21
HOMER3-208ENST00000595756 ERAL1O75616 437 aaKnown RBP16.36■□□□□ 0.21
HOMER3-208ENST00000595756 ABCB1P08183 1280 aaPredicted RBP16.36■□□□□ 0.21
HOMER3-208ENST00000595756 RAE1P78406 368 aaKnown RBP16.36■□□□□ 0.21
HOMER3-208ENST00000595756 MAD2L1Q13257 205 aaPredicted RBP16.36■□□□□ 0.21
HOMER3-208ENST00000595756 KIAA0040Q15053 153 aa16.36■□□□□ 0.21
HOMER3-208ENST00000595756 SMU1Q2TAY7 513 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms