RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 RNF32Q9H0A6 362 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 ZCCHC3Q9NUD5 404 aaKnown RBP12.45□□□□□ -0.42
VRK3-209ENST00000594948 STMN3Q9NZ72 180 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 ASF1AQ9Y294 204 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 PRR23AA6NEV1 266 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 INMT-MINDY4F8WBC2 141 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 SURF4O15260 269 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 CLEC3AO75596 197 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 LALBAP00709 142 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 PRNPP04156 253 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 INHAP05111 366 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 C8AP07357 584 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 CHRM4P08173 479 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 CHRM5P08912 532 aaPredicted RBP12.44□□□□□ -0.42
VRK3-209ENST00000594948 FPR3P25089 353 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 HTR1FP30939 366 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 NTSP30990 170 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 OMPP47874 163 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 RNF144AP50876 292 aaPredicted RBP12.44□□□□□ -0.42
VRK3-209ENST00000594948 ATP12AP54707 1039 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 CAV3P56539 151 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 TAS2R41P59536 307 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 ST3GAL3Q11203 375 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 MRPL28Q13084 256 aaKnown RBP12.44□□□□□ -0.42
VRK3-209ENST00000594948 NFE2L1Q14494 772 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 RAET1GQ6H3X3 334 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 SIGIRRQ6IA17 410 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 ZNF782Q6ZMW2 699 aaPredicted RBP12.44□□□□□ -0.42
VRK3-209ENST00000594948 UBE3DQ7Z6J8 389 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 C11orf96Q7Z7L8 435 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 FAM109AQ8N4B1 249 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 TOR1AIP2Q8NFQ8 470 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 OR5D16Q8NGK9 328 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 PIGXQ8TBF5 258 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 CXorf40AQ8TE69 158 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 WFIKKN2Q8TEU8 576 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 RERGLQ9H628 205 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 SLC35C2Q9NQQ7 365 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 WDR70Q9NW82 654 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 TEX10Q9NXF1 929 aaPredicted RBP12.44□□□□□ -0.42
VRK3-209ENST00000594948 B3GNT2Q9NY97 397 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 PTTG3PQ9NZH4 202 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 CALML5Q9NZT1 146 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 TAC3Q9UHF0 121 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 ITM2BQ9Y287 266 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 CLCA3PQ9Y6N3 262 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 HEATR5BQ9P2D3 2071 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 WASHC1A8K0Z3 465 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 NFATC1O95644 943 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 ACP5P13686 325 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 CD53P19397 219 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 PPM1AP35813 382 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 OR3A3P47888 321 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 EPHA5P54756 1037 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 CCL23P55773 120 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 TAS2R38P59533 333 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 SHC2P98077 582 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 FUT5Q11128 374 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 IKZF1Q13422 519 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 DECR1Q16698 335 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 TMEM35AQ53FP2 167 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 EOGTQ5NDL2 527 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 LY6G5CQ5SRR4 150 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 FAM46CQ5VWP2 391 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 LAMTOR1Q6IAA8 161 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 OR4C11Q6IEV9 310 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 UBE2J2Q8N2K1 259 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 OR56A1Q8NGH5 318 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 OR5AR1Q8NGP9 310 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 DIO2Q92813 273 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 DPH7Q9BTV6 452 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 MKRN2Q9H000 416 aaKnown RBP12.44□□□□□ -0.42
VRK3-209ENST00000594948 ZBP1Q9H171 429 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 KCNN2Q9H2S1 579 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 KCNK12Q9HB15 430 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 MCUBQ9NWR8 336 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 IL20Q9NYY1 176 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 C5AR2Q9P296 337 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 KLF15Q9UIH9 416 aa12.44□□□□□ -0.42
VRK3-209ENST00000594948 MUC22E2RYF6 1773 aaPredicted RBP12.44□□□□□ -0.42
VRK3-209ENST00000594948 TCF20Q9UGU0 1960 aaKnown RBP12.43□□□□□ -0.42
VRK3-209ENST00000594948 A0A0X1KG70 313 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 SMIM30A4D0T7 59 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 RGS9O75916 674 aaPredicted RBP12.43□□□□□ -0.42
VRK3-209ENST00000594948 CRYZL1O95825 349 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 HMGN1P05114 100 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 SLC6A1P30531 599 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 SOX18P35713 384 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 CD79BP40259 229 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 BUD31P41223 144 aaPredicted RBP12.43□□□□□ -0.42
VRK3-209ENST00000594948 AVPR1BP47901 424 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 ZNF77Q15935 545 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 GET4Q7L5D6 327 aaPredicted RBP12.43□□□□□ -0.42
VRK3-209ENST00000594948 DEFB128Q7Z7B8 93 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 LHFPL3Q86UP9 236 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 LRRC28Q86X40 367 aaPredicted RBP12.43□□□□□ -0.42
VRK3-209ENST00000594948 TTLQ8NG68 377 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 OR5K2Q8NHB8 316 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 ACOT11Q8WXI4 607 aaPredicted RBP12.43□□□□□ -0.42
VRK3-209ENST00000594948 SORCS1Q8WY21 1168 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms