RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 C21orf33P30042 268 aaPredicted RBP14.5□□□□□ -0.09
PNKP-204ENST00000594661 BLVRAP53004 296 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 ALDH6A1Q02252 535 aaKnown RBP14.5□□□□□ -0.09
PNKP-204ENST00000594661 CPTPQ5TA50 214 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 Q6ZS52 159 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 FAM129CQ86XR2 697 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 GHDCQ8N2G8 530 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 LINC01555Q8NAE3 123 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 DUSP18Q8NEJ0 188 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 ASB12Q8WXK4 309 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 SCARF2Q96GP6 870 aaPredicted RBP14.5□□□□□ -0.09
PNKP-204ENST00000594661 SORCS2Q96PQ0 1159 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 VNN3Q9NY84 501 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 PRSS38A1L453 326 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 EFCAB10A6NFE3 127 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 GABRR3A8MPY1 467 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 FOXE1O00358 373 aaPredicted RBP14.5□□□□□ -0.09
PNKP-204ENST00000594661 SAP18O00422 153 aaKnown RBP14.5□□□□□ -0.09
PNKP-204ENST00000594661 PCDH7O60245 1069 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 TGFB1P01137 390 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 TIA1P31483 386 aaKnown RBP eCLIP14.5□□□□□ -0.09
PNKP-204ENST00000594661 SLC19A1P41440 591 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 HOXA1P49639 335 aaPredicted RBP14.5□□□□□ -0.09
PNKP-204ENST00000594661 DAB2P98082 770 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 FLI1Q01543 452 aaPredicted RBP14.5□□□□□ -0.09
PNKP-204ENST00000594661 LARS2Q15031 903 aaKnown RBP14.5□□□□□ -0.09
PNKP-204ENST00000594661 TCEA2Q15560 299 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 HIST2H2AA3Q6FI13 130 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 LAX1Q8IWV1 398 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 SAMD14Q8IZD0 417 aaPredicted RBP14.5□□□□□ -0.09
PNKP-204ENST00000594661 HMGB4Q8WW32 186 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 RIT1Q92963 219 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 PYURFQ96I23 114 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 PHF7Q9BWX1 381 aaPredicted RBP14.5□□□□□ -0.09
PNKP-204ENST00000594661 LDAHQ9H6V9 325 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 COPS3Q9UNS2 423 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 DNAH14Q0VDD8 3507 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 TRIOBPQ9H2D6 2365 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 PRAMEF33A0A0G2JMD5 474 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 CCNDBP1O95273 360 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 ZNF682O95780 498 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 IFNA14P01570 189 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.49□□□□□ -0.09
PNKP-204ENST00000594661 C17orf64Q86WR6 236 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 TRIM69Q86WT6 500 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 ENTHD1Q8IYW4 607 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 OR1E3Q8WZA6 343 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 POP5Q969H6 163 aaKnown RBP14.49□□□□□ -0.09
PNKP-204ENST00000594661 WBP1Q96G27 269 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 CRELD1Q96HD1 420 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 BMFQ96LC9 184 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 CAMK1GQ96NX5 476 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 COL21A1Q96P44 957 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 BARHL1Q9BZE3 327 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 XKR8Q9H6D3 395 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 SLC35C2Q9NQQ7 365 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 PCDHB16Q9NRJ7 776 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 RASSF1Q9NS23 344 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 MAPRE3Q9UPY8 281 aa14.49□□□□□ -0.09
PNKP-204ENST00000594661 TMEM265A0A087WTH1 108 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 HRO43593 1189 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 SULT1B1O43704 296 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 IFNA7P01567 189 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 GPX2P18283 190 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 IDSP22304 550 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 HSD17B2P37059 387 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 CLDN20P56880 219 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 KIAA1024LP59773 190 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.48□□□□□ -0.09
PNKP-204ENST00000594661 TMIGD1Q6UXZ0 262 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 ZNF704Q6ZNC4 412 aaPredicted RBP14.48□□□□□ -0.09
PNKP-204ENST00000594661 ATCAYQ86WG3 371 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 ST8SIA2Q92186 375 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 SMPDL3AQ92484 453 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 INTS12Q96CB8 462 aaKnown RBP14.48□□□□□ -0.09
PNKP-204ENST00000594661 OR2M4Q96R27 311 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 RACGAP1Q9H0H5 632 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 SH3BP4Q9P0V3 963 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 SAMD4AQ9UPU9 718 aaKnown RBP14.48□□□□□ -0.09
PNKP-204ENST00000594661 PCDHB11Q9Y5F2 797 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 TUBAL3A6NHL2 446 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 KCNK5O95279 499 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 GBAP04062 536 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 S100A6P06703 90 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 FAM157BP0CG42 384 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 MAGEA2P43356 314 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 CCT3P49368 545 aaKnown RBP14.48□□□□□ -0.09
PNKP-204ENST00000594661 NFATC4Q14934 902 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 VMACQ2NL98 169 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 UAP1L1Q3KQV9 507 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 C10orf62Q5T681 223 aaPredicted RBP14.48□□□□□ -0.09
PNKP-204ENST00000594661 ENPP7Q6UWV6 458 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 COMMD6Q7Z4G1 85 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 ZZZ3Q8IYH5 903 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 DNAJC22Q8N4W6 341 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 DENND6BQ8NEG7 585 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 UBE2FQ969M7 185 aa14.48□□□□□ -0.09
PNKP-204ENST00000594661 KIAA1143Q96AT1 154 aaPredicted RBP14.48□□□□□ -0.09
PNKP-204ENST00000594661 GAS2L1Q99501 681 aaPredicted RBP14.48□□□□□ -0.09
PNKP-204ENST00000594661 BARD1Q99728 777 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms