RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 EIF3MQ7L2H7 374 aaKnown RBP12.34□□□□□ -0.43
VRK3-205ENST00000593919 THAP5Q7Z6K1 395 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 OR2T29Q8NH02 315 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 MIPOL1Q8TD10 442 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 SLC38A5Q8WUX1 472 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 CTHRC1Q96CG8 243 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 CLIP3Q96DZ5 547 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 C16orf58Q96GQ5 468 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 MS4A4EQ96PG1 132 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 BARD1Q99728 777 aaKnown RBP12.34□□□□□ -0.43
VRK3-205ENST00000593919 CDC6Q99741 560 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 A4GALTQ9NPC4 353 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 IL1RAPQ9NPH3 570 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 NECTIN3Q9NQS3 549 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 SLC22A11Q9NSA0 550 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 ORC6Q9Y5N6 252 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 FAM186AA6NE01 2351 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 A0A087WV62 115 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 PLOD3O60568 738 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 RFPL3O75679 317 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 SLITRK5O94991 958 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 SEMG1P04279 462 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 BCHEP06276 602 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 FGF5P12034 268 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 CCL4P13236 92 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 IL7RP16871 459 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 PCSK6P29122 969 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 SLC5A2P31639 672 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 VLDLRP98155 873 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 IL1RL1Q01638 556 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 MINDY4Q4G0A6 757 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 MFSD4BQ5TF39 518 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 SHQ1Q6PI26 577 aaKnown RBP12.33□□□□□ -0.44
VRK3-205ENST00000593919 MED25Q71SY5 747 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 COX15Q7KZN9 410 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 WDR53Q7Z5U6 358 aaPredicted RBP12.33□□□□□ -0.44
VRK3-205ENST00000593919 GALNT5Q7Z7M9 940 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 CLVS1Q8IUQ0 354 aaPredicted RBP12.33□□□□□ -0.44
VRK3-205ENST00000593919 SLC44A2Q8IWA5 706 aaPredicted RBP12.33□□□□□ -0.44
VRK3-205ENST00000593919 XAGE5Q8WWM1 108 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 RBM18Q96H35 190 aaKnown RBP12.33□□□□□ -0.44
VRK3-205ENST00000593919 REPIN1Q9BWE0 567 aaKnown RBP12.33□□□□□ -0.44
VRK3-205ENST00000593919 YTHDF1Q9BYJ9 559 aaKnown RBP12.33□□□□□ -0.44
VRK3-205ENST00000593919 ADNPQ9H2P0 1102 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 CXorf21Q9HAI6 301 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 CTSFQ9UBX1 484 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 C3orf18Q9UK00 162 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 BAG5Q9UL15 447 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 C19orf53Q9UNZ5 99 aaPredicted RBP12.33□□□□□ -0.44
VRK3-205ENST00000593919 GVINP1Q7Z2Y8 2422 aa12.33□□□□□ -0.44
VRK3-205ENST00000593919 PRAMEF27A3QJZ7 478 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 ANKRD33BA6NCL7 494 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 POLR1CO15160 346 aaPredicted RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 MITFO75030 526 aaPredicted RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 TFPTP0C1Z6 253 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 MAGEA8P43361 318 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 HLCSP50747 726 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 EFNA3P52797 238 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 SH3BGRP55822 239 aaPredicted RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 PCBP3P57721 371 aaKnown RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 INSM1Q01101 510 aaPredicted RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 PMS2P3Q13401 168 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 EXOSC7Q15024 291 aaKnown RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 MAPK11Q15759 364 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 REEP3Q6NUK4 255 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 MFSD12Q6NUT3 480 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 QSOX2Q6ZRP7 698 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 KCTD8Q6ZWB6 473 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 BPHLQ86WA6 291 aaPredicted RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 GALNT12Q8IXK2 581 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 LGI4Q8N135 537 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 VWA5B2Q8N398 1253 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 TMEM19Q96HH6 336 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 PTCHD1Q96NR3 888 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 DGAT2Q96PD7 388 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 OR7D2Q96RA2 312 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 ACTRT3Q9BYD9 372 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 POLR1BQ9H9Y6 1135 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 ADAP2Q9NPF8 381 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 MKKSQ9NPJ1 570 aaPredicted RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 THUMPD1Q9NXG2 353 aaKnown RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 TOR4AQ9NXH8 423 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 P2RX2Q9UBL9 471 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 TMEFF2Q9UIK5 374 aaPredicted RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 ANGPT4Q9Y264 503 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 MMACHCQ9Y4U1 282 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 IGFBP5P24593 272 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 STT3AP46977 705 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 MAN2A2P49641 1150 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 ANXA11P50995 505 aaKnown RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 RAD23AP54725 363 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 CLDN6P56747 220 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 ILKQ13418 452 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 SERTAD2Q14140 314 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 NEDD8Q15843 81 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 SYPL1Q16563 259 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 MEP1AQ16819 746 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 ZBED5Q49AG3 693 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 NKAIN1Q4KMZ8 207 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 RPS26P11Q5JNZ5 115 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms