RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 TCTN3Q6NUS6 607 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 ERICH5Q6P6B1 374 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 AAGABQ6PD74 315 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 PAPD4Q6PIY7 484 aaKnown RBP11.06□□□□□ -0.64
DDX39A-219ENST00000592927 TMEM64Q6YI46 380 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 DHFR2Q86XF0 187 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 CALHM3Q86XJ0 350 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 TMEM102Q8N9M5 508 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-219ENST00000592927 OR2T12Q8NG77 320 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 OR10A6Q8NH74 314 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 SFXN5Q8TD22 340 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 MARVELD3Q96A59 401 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 REXO5Q96IC2 774 aaKnown RBP11.06□□□□□ -0.64
DDX39A-219ENST00000592927 ZNF681Q96N22 645 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 ZNF583Q96ND8 569 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 AMDHD1Q96NU7 426 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 PELOQ9BRX2 385 aaKnown RBP11.06□□□□□ -0.64
DDX39A-219ENST00000592927 SLC35A5Q9BS91 424 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 GLIPR2Q9H4G4 154 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 DCLRE1BQ9H816 532 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 ZNF160Q9HCG1 818 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 ADAP2Q9NPF8 381 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 SLAMF7Q9NQ25 335 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 MAGEL2Q9UJ55 1249 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 ERRFI1Q9UJM3 462 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-219ENST00000592927 ERVK-11Q9UQG0 969 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 CLDN16Q9Y5I7 305 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 SNX13Q9Y5W8 968 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 NUP210LQ5VU65 1888 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 PDZD2O15018 2839 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 ELOVL7A1L3X0 281 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 AQP12BA6NM10 295 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 DYRK3O43781 588 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 ENTPD5O75356 428 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 SLITRK5O94991 958 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 ATP6V1G2O95670 118 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 SLC35E2P0CK97 266 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 ICAM2P13598 275 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 CPMP14384 443 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 PORP16435 677 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 EFNA1P20827 205 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 FEN1P39748 380 aaKnown RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 STT3AP46977 705 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 NCBP2P52298 156 aaKnown RBP eCLIP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 TXNL4AP83876 142 aaKnown RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 MRPL49Q13405 166 aaKnown RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 CCNIQ14094 377 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 ZNF750Q32MQ0 723 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 MTX3Q5HYI7 312 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 DCAF10Q5QP82 559 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 CPZQ66K79 652 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 BHLHB9Q6PI77 547 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 AQP12AQ8IXF9 295 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 ST13P4Q8IZP2 240 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 LRRC25Q8N386 305 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 CLEC1AQ8NC01 280 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 FAM156AQ8NDB6 213 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 OR52E4Q8NGH9 312 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 OR52N2Q8NGI0 321 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 DAZLQ92904 295 aaKnown RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 PPWD1Q96BP3 646 aaKnown RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 NEURL3Q96EH8 262 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 CNRIP1Q96F85 164 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 AURKBQ96GD4 344 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 LRGUKQ96M69 825 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 SCN2AQ99250 2005 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 WDR77Q9BQA1 342 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-219ENST00000592927 IKZF5Q9H5V7 419 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 CXorf36Q9H7Y0 433 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 ATP13A2Q9NQ11 1180 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 CLCA3PQ9Y6N3 262 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 CELSR1Q9NYQ6 3014 aa11.05□□□□□ -0.64
DDX39A-219ENST00000592927 RNF103-CHMP3A0A140T963 221 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 SAGE2PA6NJ88 616 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 C17orf105B2RV13 164 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 MKRN2OSH3BPM6 223 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 GSTA4O15217 222 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 HNRNPRO43390 633 aaKnown RBP11.04□□□□□ -0.64
DDX39A-219ENST00000592927 PSMG1O95456 288 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 GPC1P35052 558 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 MSX2P35548 267 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-219ENST00000592927 SOAT1P35610 550 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 CHI3L1P36222 383 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-219ENST00000592927 GZMMP51124 257 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 AP2B1P63010 937 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 PRR5P85299 388 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 RBBP4Q09028 425 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 HSPB3Q12988 150 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 AIMP2Q13155 320 aaKnown RBP11.04□□□□□ -0.64
DDX39A-219ENST00000592927 GAB1Q13480 694 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 RGNQ15493 299 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 EXT1Q16394 746 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 CYP51A1Q16850 503 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 BTBD16Q32M84 506 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 IRAK1BP1Q5VVH5 260 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 SAXO2Q658L1 398 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 FAM180BQ6P0A1 224 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 ZFP1Q6P2D0 407 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 ZNF551Q7Z340 670 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-219ENST00000592927 IFNEQ86WN2 208 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms