RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 JKAMPQ9P055 326 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 DCDC2Q9UHG0 476 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 ST6GALNAC2Q9UJ37 374 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 EDARQ9UNE0 448 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 EXO1Q9UQ84 846 aaKnown RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 EXPH5Q8NEV8 1989 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 A0A1B0GTL3 188 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 A6NNC1 897 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 ICOSLGO75144 302 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 CBR3O75828 277 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 OTCP00480 354 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 EPXP11678 715 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 CD99P14209 185 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 CTSSP25774 331 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 UQCRC1P31930 480 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 OPRM1P35372 400 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 PTGDSP41222 190 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 PPICP45877 212 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 CCT5P48643 541 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 MASP1P48740 699 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 EMDP50402 254 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 NAGLUP54802 743 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 SNTB1Q13884 538 aaKnown RBP9.48□□□□□ -0.89
VPS4B-207ENST00000591519 EIPR1Q53HC9 387 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 UNC50Q53HI1 259 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 WIPI1Q5MNZ9 446 aaPredicted RBP9.48□□□□□ -0.89
VPS4B-207ENST00000591519 C1orf229Q6ZS94 237 aaPredicted RBP9.48□□□□□ -0.89
VPS4B-207ENST00000591519 SH2D5Q6ZV89 423 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 ADGRE4PQ86SQ3 457 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 KIF18BQ86Y91 864 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 TGIF2LYQ8IUE0 185 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 MREGQ8N565 214 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 CHDHQ8NE62 594 aaPredicted RBP9.48□□□□□ -0.89
VPS4B-207ENST00000591519 OR1J4Q8NGS1 313 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 ZNF483Q8TF39 744 aaPredicted RBP9.48□□□□□ -0.89
VPS4B-207ENST00000591519 ABTB1Q969K4 478 aaPredicted RBP9.48□□□□□ -0.89
VPS4B-207ENST00000591519 MBD6Q96DN6 1003 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 UCN2Q96RP3 112 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 GPATCH1Q9BRR8 931 aaKnown RBP9.48□□□□□ -0.89
VPS4B-207ENST00000591519 IQCGQ9H095 443 aaKnown RBP9.48□□□□□ -0.89
VPS4B-207ENST00000591519 LIME1Q9H400 295 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 RRAGDQ9NQL2 400 aaPredicted RBP9.48□□□□□ -0.89
VPS4B-207ENST00000591519 FARSBQ9NSD9 589 aaKnown RBP9.48□□□□□ -0.89
VPS4B-207ENST00000591519 NMRK1Q9NWW6 199 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 PRODH2Q9UF12 536 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 ZNF225Q9UK10 706 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 GRID1Q9ULK0 1009 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 CBLCQ9ULV8 474 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 SNX6Q9UNH7 406 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 SLC12A4Q9UP95 1085 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 DTX4Q9Y2E6 619 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 SLC6A5Q9Y345 797 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 MRPS18CQ9Y3D5 142 aaKnown RBP9.48□□□□□ -0.89
VPS4B-207ENST00000591519 ABCA4P78363 2273 aa9.48□□□□□ -0.89
VPS4B-207ENST00000591519 G3V2L1 256 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 PLIN3O60664 434 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 BCAS2O75934 225 aaPredicted RBP9.47□□□□□ -0.89
VPS4B-207ENST00000591519 OR4F21O95013 312 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 GOSR1O95249 250 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 CBX7O95931 251 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 PDYNP01213 254 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 HSD3B1P14060 373 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 CREB1P16220 341 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 HSD3B2P26439 372 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 FEN1P39748 380 aaKnown RBP9.47□□□□□ -0.89
VPS4B-207ENST00000591519 MAP2K3P46734 347 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 PRKAA2P54646 552 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 WNT3P56703 355 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 SORDQ00796 357 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 CLCQ05315 142 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 ZNF844Q08AG5 666 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 TRMT12Q53H54 448 aaKnown RBP9.47□□□□□ -0.89
VPS4B-207ENST00000591519 ZNF678Q5SXM1 525 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 CEP85LQ5SZL2 805 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 C6orf163Q5TEZ5 329 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 LETMD1Q6P1Q0 360 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 ANGPTL8Q6UXH0 198 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 ZYG11AQ6WRX3 759 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 CAMKMTQ7Z624 323 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 TRABD2AQ86V40 505 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 LCA5Q86VQ0 697 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 CDC20BQ86Y33 519 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 SLC22A9Q8IVM8 553 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 PRR22Q8IZ63 422 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 RIBC1Q8N443 379 aaPredicted RBP9.47□□□□□ -0.89
VPS4B-207ENST00000591519 WDSUB1Q8N9V3 476 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 SIMC1Q8NDZ2 872 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 FAM83FQ8NEG4 500 aaPredicted RBP9.47□□□□□ -0.89
VPS4B-207ENST00000591519 ZNF675Q8TD23 568 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 SELENOMQ8WWX9 145 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 ERP27Q96DN0 273 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 OMA1Q96E52 524 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 CNRIP1Q96F85 164 aaPredicted RBP9.47□□□□□ -0.89
VPS4B-207ENST00000591519 ZFP3Q96NJ6 502 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 ZIM3Q96PE6 472 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 NODALQ96S42 347 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 FAIM2Q9BWQ8 316 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 SHCBP1LQ9BZQ2 653 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 ROPN1BQ9BZX4 212 aaPredicted RBP9.47□□□□□ -0.89
VPS4B-207ENST00000591519 BRINP2Q9C0B6 783 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms