RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 IFI6P09912 130 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 RFPL3SP0C7P2 107 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 MYZAPP0CAP1 466 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 ALDH3A1P30838 453 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 GPC1P35052 558 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 HPCAL1P37235 193 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 RPL3P39023 403 aaKnown RBP9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 ASMTP46597 345 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 EMDP50402 254 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 CDK9P50750 372 aaKnown RBP9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 NUP107P57740 925 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 RPL38P63173 70 aaKnown RBP9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 DUSP2Q05923 314 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 DUSP8Q13202 625 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 TRMT12Q53H54 448 aaKnown RBP9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 KANK2Q63ZY3 851 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 BICRALQ6AI39 1079 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 ANGPTL8Q6UXH0 198 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 CROCCP2Q86T23 111 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 MREGQ8N565 214 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 OR10Q1Q8NGQ4 319 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 TCP10LQ8TDR4 215 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 TWIST2Q8WVJ9 160 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 TMBIM1Q969X1 311 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 LRRC46Q96FV0 321 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 SLC35A4Q96G79 324 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 ZNF764Q96H86 408 aaPredicted RBP9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 VSTM2LQ96N03 204 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 COL21A1Q96P44 957 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 GATA5Q9BWX5 397 aaPredicted RBP9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 C12orf65Q9H3J6 166 aaKnown RBP9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 C3orf14Q9HBI5 128 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 PROK2Q9HC23 129 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 SLC24A3Q9HC58 644 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 RNF6Q9Y252 685 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 V9GYY5 206 aaPredicted RBP9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 MED12LQ86YW9 2145 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 TTC36A6NLP5 189 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 MYO1GB0I1T2 1018 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 GNB5O14775 395 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 SPAG7O75391 227 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 JUNP05412 331 aaKnown RBP9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 HPNP05981 417 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 MC3RP41968 323 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 TRPC1P48995 793 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 PSMD4P55036 377 aaKnown RBP9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 PMPCAQ10713 525 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 GALNTL6Q49A17 601 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 SH2D4BQ5SQS7 431 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 TMEM107Q6UX40 140 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 R3HCC1LQ7Z5L2 792 aaKnown RBP9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 KIRREL3Q8IZU9 778 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 CLYBLQ8N0X4 340 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 MARVELD2Q8N4S9 558 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 OR7G2Q8NG99 324 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 HGDQ93099 445 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 PPCDCQ96CD2 204 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 ZBED6CLQ96FA7 236 aaPredicted RBP9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 PPP3R2Q96LZ3 170 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 MECRQ9BV79 373 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 TMEM109Q9BVC6 243 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 UBQLN3Q9H347 655 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 Q9N2J8 555 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 KCNJ16Q9NPI9 418 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 ALKBH4Q9NXW9 302 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 TAS2R7Q9NYW3 318 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 SLC17A7Q9P2U7 560 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 SPRR3Q9UBC9 169 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 ITGB1BP2Q9UKP3 347 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 MAPRE3Q9UPY8 281 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 GPR55Q9Y2T6 319 aaPredicted RBP9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 WIF1Q9Y5W5 379 aa9.69□□□□□ -0.86
CLPTM1-211ENST00000589347 MED12Q93074 2177 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 PCNX3Q9H6A9 2034 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 HSPB2A8KAH6 182 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 PLOD2O00469 737 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 PIP5K1BO14986 540 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 LSM1O15116 133 aaKnown RBP9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 DIAPH2O60879 1101 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 UGT2B11O75310 529 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 SNUPNO95149 360 aaKnown RBP9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 SNRPB2P08579 225 aaKnown RBP9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 FGF4P08620 206 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 ENDOUP21128 410 aaKnown RBP9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 PTPN6P29350 595 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 SSTR2P30874 369 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 ZFP36L2P47974 494 aaKnown RBP9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 CLK3P49761 638 aaKnown RBP9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 PNLIPRP2P54317 469 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 HSPB3Q12988 150 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 RCAN2Q14206 197 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 HSPB2Q16082 182 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 DECR1Q16698 335 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 SLC25A35Q3KQZ1 300 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 VPS26BQ4G0F5 336 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 ATP6AP1LQ52LC2 224 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 NHSL2Q5HYW2 709 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 EMC4Q5J8M3 183 aa9.68□□□□□ -0.86
CLPTM1-211ENST00000589347 RIPPLY2Q5TAB7 128 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms