RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ENPP4Q9Y6X5 453 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 RALGAPA1Q6GYQ0 2036 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 CCDC88CQ9P219 2028 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 IGKV3D-11A0A0A0MRZ8 115 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 MYOCOSA0A1B0GUC4 107 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 TTC36A6NLP5 189 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 A8MVJ9 347 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 C1QTNF9BB2RNN3 333 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 SYT5O00445 386 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 PRAMEF2O60811 474 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 ALPLP05186 524 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 C1QTNF9P0C862 333 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 MAOAP21397 527 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 S1PR1P21453 382 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 PPP2R2BQ00005 443 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 ZFP36L1Q07352 338 aaKnown RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 EXOSC7Q15024 291 aaKnown RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 DUSP5Q16690 384 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 NHSL2Q5HYW2 709 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 OTUD3Q5T2D3 398 aaPredicted RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 PHF19Q5T6S3 580 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 PRAMEF17Q5VTA0 474 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 SIMC1Q8NDZ2 872 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 GPR32P1Q8NGA4 272 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 OR52R1Q8NGF1 315 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 MAGEE2Q8TD90 523 aaPredicted RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 PMM1Q92871 262 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 CDS1Q92903 461 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 FKBP10Q96AY3 582 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 PTCHD1Q96NR3 888 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 LMF2Q9BU23 707 aaKnown RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 YIPF2Q9BWQ6 316 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 PINK1Q9BXM7 581 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 NECTIN3Q9NQS3 549 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 POLE3Q9NRF9 147 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 SH3GLB1Q9Y371 365 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 SAMHD1Q9Y3Z3 626 aaKnown RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 ZFYVE26Q68DK2 2539 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 DLGAP1O14490 977 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 HYAL3O43820 417 aaPredicted RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 JRKO75564 520 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 NKX2-2O95096 273 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 RECKO95980 971 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 ALPPP05187 535 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 GUSBP08236 651 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 ZNF806P0C7X5 589 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 FGF5P12034 268 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 RHCEP18577 417 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 CSTF2P33240 577 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 RORAP35398 523 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 IST1P53990 364 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 FUT7Q11130 342 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 ZNF155Q12901 538 aaPredicted RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 IL11RAQ14626 422 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 ZNHIT3Q15649 155 aaPredicted RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 RFX4Q33E94 735 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 C6orf52Q5T4I8 152 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 MLIPQ5VWP3 458 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 TBPL2Q6SJ96 375 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 DGAT2L6Q6ZPD8 337 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 TSEN54Q7Z6J9 526 aaKnown RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 PPP1R3BQ86XI6 285 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 COX18Q8N8Q8 333 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 AGBL5Q8NDL9 886 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 OR7G1Q8NGA0 311 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 RHBDD1Q8TEB9 315 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 PIP5K1AQ99755 562 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 ADI1Q9BV57 179 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 ANKRD60Q9BZ19 345 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 TGIF2Q9GZN2 237 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 ZNF350Q9GZX5 532 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 CACYBPQ9HB71 228 aaKnown RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 VNN3Q9NY84 501 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 LHX6Q9UPM6 363 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 SLC9A8Q9Y2E8 581 aa11.24□□□□□ -0.61
CCBE1-203ENST00000589116 FAM32AQ9Y421 112 aaKnown RBP11.24□□□□□ -0.61
CCBE1-203ENST00000589116 FER1L5A0AVI2 2057 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 IGLV3-12A0A075B6K2 115 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 PRAMEF25A6NGN4 478 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 DYRK3O43781 588 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 GDF9O60383 454 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 FOXD2O60548 495 aaPredicted RBP11.23□□□□□ -0.61
CCBE1-203ENST00000589116 SCRG1O75711 98 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 DIRAS1O95057 198 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 ONECUT2O95948 504 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 IFNA16P05015 189 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 PABPC4LP0CB38 370 aaKnown RBP11.23□□□□□ -0.61
CCBE1-203ENST00000589116 THRBP10828 461 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 TNFRSF1BP20333 461 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 PRKAR1BP31321 381 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 RRM2P31350 389 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 OR1E2P47887 323 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 PDX1P52945 283 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 RHAGQ02094 409 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 CHRNEQ04844 493 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 MERTKQ12866 999 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 DUSP8Q13202 625 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 PDK3Q15120 406 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 CSRP2Q16527 193 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms