RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SFXN3Q9BWM7 321 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 BRF2Q9HAW0 419 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 GIMAP4Q9NUV9 329 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 ZNF639Q9UID6 485 aa12.45□□□□□ -0.42
HDAC5-208ENST00000588419 NAV3Q8IVL0 2385 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 C17orf51A8MQB3 221 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 MANBAO00462 879 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 PLOD2O00469 737 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 CASKO14936 926 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 URI1O94763 535 aaPredicted RBP12.44□□□□□ -0.42
HDAC5-208ENST00000588419 ADSLP30566 484 aaPredicted RBP12.44□□□□□ -0.42
HDAC5-208ENST00000588419 SRD5A2P31213 254 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 PPICP45877 212 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 DIO3P55073 304 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 SIRPAP78324 504 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 HMGCS1Q01581 520 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 CLCQ05315 142 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 STX5Q13190 355 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 SNTA1Q13424 505 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 KRTAP21-3Q3LHN1 58 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 ZNF628Q5EBL2 1059 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 TMEM81Q6P7N7 255 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 AAGABQ6PD74 315 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 LARP4Q71RC2 724 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDAC5-208ENST00000588419 CHMP1BQ7LBR1 199 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 ZNF572Q7Z3I7 529 aaPredicted RBP12.44□□□□□ -0.42
HDAC5-208ENST00000588419 CNEP1R1Q8N9A8 125 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 ISL2Q96A47 359 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 MBD6Q96DN6 1003 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 FMO2Q99518 471 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 SMR3AQ99954 134 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 FOLH1BQ9HBA9 442 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 JKAMPQ9P055 326 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 PPP4R1LQ9P1A2 415 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 CLCF1Q9UBD9 225 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 VPS29Q9UBQ0 182 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 EIF3LQ9Y262 564 aaKnown RBP12.44□□□□□ -0.42
HDAC5-208ENST00000588419 DLGAP4Q9Y2H0 992 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 OR10H1Q9Y4A9 318 aa12.44□□□□□ -0.42
HDAC5-208ENST00000588419 OR6C70A6NIJ9 312 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 RCBTB2O95199 551 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 KRT6AP02538 564 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 HRGP04196 525 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 KRT6BP04259 564 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 COL6A2P12110 1019 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 CPN1P15169 458 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 TAC1P20366 129 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 DRD5P21918 477 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 GRK2P25098 689 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 RFX3P48380 749 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 KRT6CP48668 564 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 HTR6P50406 440 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 LHX2P50458 406 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 TRA2BP62995 288 aaKnown RBP12.43□□□□□ -0.42
HDAC5-208ENST00000588419 RASA2Q15283 850 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 RAET1LQ5VY80 246 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 PPP4R4Q6NUP7 873 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 SCIMPQ6UWF3 145 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 NPSR1Q6W5P4 371 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 GPRIN3Q6ZVF9 776 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 SLC44A2Q8IWA5 706 aaPredicted RBP12.43□□□□□ -0.42
HDAC5-208ENST00000588419 FAM9CQ8IZT9 166 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 DCAKDQ8WVC6 231 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 WNT2BQ93097 391 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 CTHRC1Q96CG8 243 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 MTBPQ96DY7 904 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 DTNBP1Q96EV8 351 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 ZNF681Q96N22 645 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 ZFP3Q96NJ6 502 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 FAM111AQ96PZ2 611 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 TMEM237Q96Q45 408 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 ACBD3Q9H3P7 528 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 PLEKHF2Q9H8W4 249 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 NEUROD4Q9HD90 331 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 DLL4Q9NR61 685 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 C6orf203Q9P0P8 240 aaPredicted RBP12.43□□□□□ -0.42
HDAC5-208ENST00000588419 FETUBQ9UGM5 382 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 MCM8Q9UJA3 840 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 ZNF225Q9UK10 706 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 PACSIN3Q9UKS6 424 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 GPR55Q9Y2T6 319 aaPredicted RBP12.43□□□□□ -0.42
HDAC5-208ENST00000588419 DSCAMO60469 2012 aa12.43□□□□□ -0.42
HDAC5-208ENST00000588419 A0A087WUV0 522 aaPredicted RBP12.42□□□□□ -0.42
HDAC5-208ENST00000588419 UQCRHLA0A096LP55 91 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 EXOC1LA0A1B0GW35 172 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 A0A1W2PPR1 153 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 TO15178 435 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 SEC14L5O43304 696 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 GMFGO60234 142 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 ABCB7O75027 752 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 BCAS2O75934 225 aaPredicted RBP12.42□□□□□ -0.42
HDAC5-208ENST00000588419 SBK3P0C264 359 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 DPP4P27487 766 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 HSD17B3P37058 310 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 GFRA1P56159 465 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 ACSM2AQ08AH3 577 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 CSTF3Q12996 717 aaKnown RBP12.42□□□□□ -0.42
HDAC5-208ENST00000588419 EFR3AQ14156 821 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 UNC50Q53HI1 259 aa12.42□□□□□ -0.42
HDAC5-208ENST00000588419 ACSM2BQ68CK6 577 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms