RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 TGFB1P01137 390 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 S100A5P33763 92 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 ETV6P41212 452 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 UGT2B15P54855 530 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 TAS2R50P59544 299 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 PTGES3Q15185 160 aaKnown RBP13.75□□□□□ -0.21
CCDC43-203ENST00000588210 PRSS53Q2L4Q9 553 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 NXPE4Q6UWF7 544 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 OR9A1PQ8NGU1 263 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 OR5AK3PQ8NH89 298 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 TXNDC15Q96J42 360 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 DEPDC7Q96QD5 511 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 ASF1AQ9Y294 204 aa13.75□□□□□ -0.21
CCDC43-203ENST00000588210 FAM32AQ9Y421 112 aaKnown RBP13.75□□□□□ -0.21
CCDC43-203ENST00000588210 DSPPQ9NZW4 1301 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 MED19A0JLT2 244 aaPredicted RBP13.74□□□□□ -0.21
CCDC43-203ENST00000588210 D6RAR5 112 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 SAP18O00422 153 aaKnown RBP13.74□□□□□ -0.21
CCDC43-203ENST00000588210 IFNW1P05000 195 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 PIPP12273 146 aaPredicted RBP13.74□□□□□ -0.21
CCDC43-203ENST00000588210 SOAT1P35610 550 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 DSTNP60981 165 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 SLC13A2Q13183 592 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 AQP11Q8NBQ7 271 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 UBE2E3Q969T4 207 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 CENPOQ9BU64 300 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 SPNS1Q9H2V7 528 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 ICKQ9UPZ9 632 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 PCDHGA4Q9Y5G9 962 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 PEX16Q9Y5Y5 336 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 PTPRBP23467 1997 aa13.74□□□□□ -0.21
CCDC43-203ENST00000588210 M0R129 80 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 UBXN7O94888 489 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 RPN2P04844 631 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 IL3P08700 152 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 UQCRC2P22695 453 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 CLDN6P56747 220 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 TAP2Q03519 686 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 TIMM50Q3ZCQ8 353 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 CYP27C1Q4G0S4 372 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 NKAIN2Q5VXU1 208 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 ZNF770Q6IQ21 691 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 KLHL17Q6TDP4 642 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 USP53Q70EK8 1073 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 SLC44A2Q8IWA5 706 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 PARP16Q8N5Y8 322 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 OR5K2Q8NHB8 316 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 GTPBP3Q969Y2 492 aaKnown RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 CHCHD6Q9BRQ6 235 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 SCNM1Q9BWG6 230 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 TMEM121BQ9BXQ6 578 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 KLHL25Q9H0H3 589 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 CCDC177Q9NQR7 707 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 SACM1LQ9NTJ5 587 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 ATXN7L1Q9ULK2 861 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 NINQ8N4C6 2090 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 UNC13CQ8NB66 2214 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 HAT1O14929 419 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 KLK1P06870 262 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 CHMP24386 653 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 SLC15A1P46059 708 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 ALDH9A1P49189 494 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 PPM1FP49593 454 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 CRISP1P54107 249 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 SHC2P98077 582 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 TARDBPQ13148 414 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■■■□ 23.1
CCDC43-203ENST00000588210 TSTA3Q13630 321 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 GANABQ14697 944 aaKnown RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 ISXQ2M1V0 245 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 SOWAHCQ53LP3 525 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 WDR74Q6RFH5 385 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 POC5Q8NA72 575 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 FAM83FQ8NEG4 500 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 APOBEC4Q8WW27 367 aaKnown RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 RNF167Q9H6Y7 350 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 NMNAT1Q9HAN9 279 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 CLN6Q9NWW5 311 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 TAS2R16Q9NYV7 291 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 CFL2Q9Y281 166 aa13.73□□□□□ -0.21
CCDC43-203ENST00000588210 GPC6Q9Y625 555 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-203ENST00000588210 CSO75390 466 aaKnown RBP13.72□□□□□ -0.21
CCDC43-203ENST00000588210 MED26O95402 600 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 ADAP00813 363 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 PROS1P07225 676 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 POU2F1P14859 743 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 CRISP3P54108 245 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 FOXK2Q01167 660 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 SELENBP1Q13228 472 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 FRMPD2BQ6IN97 320 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 REEP3Q6NUK4 255 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 TMEM71Q6P5X7 295 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 FAM92BQ6ZTR7 304 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 VN1R5Q7Z5H4 357 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 ATCAYQ86WG3 371 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 TAGAPQ8N103 731 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 OR4D9Q8NGE8 314 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 OR5AR1Q8NGP9 310 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 HTRA1Q92743 480 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 Q96MT0 163 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms