RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CAPRIN1Q14444 709 aaKnown RBP12.59□□□□□ -0.39
VMP1-203ENST00000586245 DUSP5Q16690 384 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 RUNDC3AQ59EK9 446 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 CT45A2Q5DJT8 189 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 ATAD3BQ5T9A4 648 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 TNFAIP8L2Q6P589 184 aaPredicted RBP12.59□□□□□ -0.39
VMP1-203ENST00000586245 OPN5Q6U736 354 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 NPSR1Q6W5P4 371 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 BEST3Q8N1M1 668 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 TMEM156Q8N614 296 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 COX18Q8N8Q8 333 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 SLC16A11Q8NCK7 471 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 OR52N2Q8NGI0 321 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 MIPOL1Q8TD10 442 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 ASB15Q8WXK1 588 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 TM9SF4Q92544 642 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 HOXB13Q92826 284 aaPredicted RBP12.59□□□□□ -0.39
VMP1-203ENST00000586245 OTUB1Q96FW1 271 aaPredicted RBP12.59□□□□□ -0.39
VMP1-203ENST00000586245 NSL1Q96IY1 281 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 ANKRD27Q96NW4 1050 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 OR7D2Q96RA2 312 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 SMAD5Q99717 465 aaKnown RBP12.59□□□□□ -0.39
VMP1-203ENST00000586245 SH3GL1Q99961 368 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 THUMPD3Q9BV44 507 aaKnown RBP12.59□□□□□ -0.39
VMP1-203ENST00000586245 OR51I1Q9H343 314 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 EXD2Q9NVH0 621 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 MRTO4Q9UKD2 239 aaKnown RBP12.59□□□□□ -0.39
VMP1-203ENST00000586245 CBLCQ9ULV8 474 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 ZNF451Q9Y4E5 1061 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 NPFFR2Q9Y5X5 522 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 TPRP12270 2363 aaKnown RBP12.59□□□□□ -0.39
VMP1-203ENST00000586245 CFAP47Q6ZTR5 3102 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 A8MVJ9 347 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 CDK2AP1O14519 115 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 ASNA1O43681 348 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 MAN1A2O60476 641 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 UNC5CO95185 931 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 CBX6O95503 412 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 NADKO95544 446 aaPredicted RBP12.58□□□□□ -0.4
VMP1-203ENST00000586245 OR12D1P0DN82 309 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 TRHRP34981 398 aaPredicted RBP12.58□□□□□ -0.4
VMP1-203ENST00000586245 MAP3K8P41279 467 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 PSMD4P55036 377 aaKnown RBP12.58□□□□□ -0.4
VMP1-203ENST00000586245 POU6F2P78424 691 aaPredicted RBP12.58□□□□□ -0.4
VMP1-203ENST00000586245 OC90Q02509 493 aaPredicted RBP12.58□□□□□ -0.4
VMP1-203ENST00000586245 FADDQ13158 208 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 KCNAB2Q13303 367 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 DECR1Q16698 335 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 CYP27C1Q4G0S4 372 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.58□□□□□ -0.4
VMP1-203ENST00000586245 HACD2Q6Y1H2 254 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 GPALPP1Q8IXQ4 340 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 DND1Q8IYX4 353 aaKnown RBP12.58□□□□□ -0.4
VMP1-203ENST00000586245 PRR22Q8IZ63 422 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 SLC34A3Q8N130 599 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 HORMAD2Q8N7B1 307 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 OR5D16Q8NGK9 328 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 XAGE5Q8WWM1 108 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 PIK3R3Q92569 461 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 CDS1Q92903 461 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 SLC35A4Q96G79 324 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 HOPXQ9BPY8 73 aaPredicted RBP12.58□□□□□ -0.4
VMP1-203ENST00000586245 CPPED1Q9BRF8 314 aaPredicted RBP12.58□□□□□ -0.4
VMP1-203ENST00000586245 UTP23Q9BRU9 249 aaKnown RBP12.58□□□□□ -0.4
VMP1-203ENST00000586245 SERHL2Q9H4I8 314 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 HPF1Q9NWY4 346 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 THUMPD1Q9NXG2 353 aaKnown RBP12.58□□□□□ -0.4
VMP1-203ENST00000586245 PCDHGB7Q9Y5F8 929 aa12.58□□□□□ -0.4
VMP1-203ENST00000586245 NUP214P35658 2090 aaPredicted RBP12.57□□□□□ -0.4
VMP1-203ENST00000586245 C15orf38-AP3S2A0A0A6YYH1 394 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 GXYLT2A0PJZ3 443 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 TMEM247A6NEH6 219 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 FXYD1O00168 92 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 REM1O75628 298 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 OR6B1O95007 311 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 WDPCPO95876 746 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 AK1P00568 194 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 C1QCP02747 245 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 ETFAP13804 333 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 NAGAP17050 411 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 CALB2P22676 271 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 ABCD3P28288 659 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 IL12BP29460 328 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 PIGAP37287 484 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 SOX3P41225 446 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 MAN2A2P49641 1150 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 HLCSP50747 726 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 MTPNP58546 118 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 ARG2P78540 354 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 MRPS22P82650 360 aaKnown RBP12.57□□□□□ -0.4
VMP1-203ENST00000586245 RGNQ15493 299 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 LINC00303Q3SY05 128 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 COX20Q5RI15 118 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 EXOSC6Q5RKV6 272 aaKnown RBP12.57□□□□□ -0.4
VMP1-203ENST00000586245 NANOGP8Q6NSW7 305 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 IL20RBQ6UXL0 311 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 C16orf62Q7Z3J2 963 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 ARPINQ7Z6K5 226 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 OR8J3Q8NGG0 315 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms