RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 PTPN4P29074 926 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 PRDX6P30041 224 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 MDH2P40926 338 aaKnown RBP2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 KRT6CP48668 564 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 POU3F4P49335 361 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 SGSHP51688 502 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 ARHGDIBP52566 201 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 PPIAP62937 165 aaKnown RBP2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 NOP14P78316 857 aaKnown RBP2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 MYBPC1Q00872 1141 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 BNIP1Q12981 228 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 ZIC1Q15915 447 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 QRICH1Q2TAL8 776 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 ZNF699Q32M78 642 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 CGB2Q6NT52 195 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 WDR88Q6ZMY6 472 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 HSCBQ8IWL3 235 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 CENPSQ8N2Z9 138 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 C11orf42Q8N5U0 333 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 SLC13A3Q8WWT9 602 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 CCT8L2Q96SF2 557 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 TSPAN18Q96SJ8 248 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 COQ7Q99807 217 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 XPO4Q9C0E2 1151 aaKnown RBP2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 RSPH9Q9H1X1 276 aaPredicted RBP2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 ALG9Q9H6U8 611 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 HOMER3Q9NSC5 361 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 ZNF275Q9NSD4 429 aaPredicted RBP2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 STARD5Q9NSY2 213 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 IMPAD1Q9NX62 359 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 TRIM10Q9UDY6 481 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 PURGQ9UJV8 347 aaKnown RBP2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 FZR1Q9UM11 496 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 NTNG1Q9Y2I2 539 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 NESP48681 1621 aa2.78□□□□□ -1.96
RPRD1A-203ENST00000585879 HMGXB3Q12766 1538 aa2.78□□□□□ -1.97
RPRD1A-203ENST00000585879 CEP164Q9UPV0 1460 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 POGZQ7Z3K3 1410 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 C11orf98E9PRG8 122 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 ECDO95905 644 aaPredicted RBP2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 PGAM2P15259 253 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 FASP25445 335 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 PTBP1P26599 531 aaKnown RBP eCLIP2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 SLC25A1P53007 311 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 PAX2Q02962 417 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 SMC1AQ14683 1233 aaKnown RBP2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 TGIF1Q15583 401 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 PRR30Q53SZ7 412 aaPredicted RBP2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 FHL5Q5TD97 284 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 RABEPKQ7Z6M1 372 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 RANBP3LQ86VV4 465 aaPredicted RBP2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 ERICH1Q86X53 443 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 MCOLN2Q8IZK6 566 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 CBWD1Q9BRT8 395 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 FTHL17Q9BXU8 183 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 NACA2Q9H009 215 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 IKZF5Q9H5V7 419 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 FAM124BQ9H5Z6 455 aaPredicted RBP2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 IL19Q9UHD0 177 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 IL20RAQ9UHF4 553 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 MOSPD1Q9UJG1 213 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 RNF115Q9Y4L5 304 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 TOP2BQ02880 1626 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 CUX1P39880 1505 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 CFTRP13569 1480 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 RAPGEF2Q9Y4G8 1499 aa2.77□□□□□ -1.97
RPRD1A-203ENST00000585879 CLIP1P30622 1438 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 KIF27Q86VH2 1401 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 BIVM-ERCC5R4GMW8 1640 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 NPIPA5A0A0B4J1W7 369 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 FAM168BA1KXE4 195 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 CFAP73A6NFT4 308 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 SLC9B1P1A6NJY1 282 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 NPIPA5E9PKD4 350 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 GPAA1O43292 621 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 HTATSF1O43719 755 aaKnown RBP2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 BAG2O95816 211 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 ALPPP05187 535 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 ALPPL2P10696 532 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 PRDX2P32119 198 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 ATP6V1E1P36543 226 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 ACVR1BP36896 505 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 LYZP61626 148 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 SRYQ05066 204 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 CCDC40Q4G0X9 1142 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 HERC4Q5GLZ8 1057 aaPredicted RBP2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 UTF1Q5T230 341 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 IL23RQ5VWK5 629 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 OR6B2Q6IFH4 312 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 PRR5LQ6MZQ0 368 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 PAMR1Q6UXH9 720 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 P4HA3Q7Z4N8 544 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 TAF8Q7Z7C8 310 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 GPR65Q8IYL9 337 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 ZNF525Q8N782 197 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 FNDC8Q8TC99 324 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 C11orf24Q96F05 449 aaPredicted RBP2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 NSMCE2Q96MF7 247 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 CARD6Q9BX69 1037 aa2.76□□□□□ -1.97
RPRD1A-203ENST00000585879 TMEM231Q9H6L2 316 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms