RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 CORO7P57737 925 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 SELPLGQ14242 412 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 NNATQ16517 81 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 DUSP5Q16690 384 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 CYP51A1Q16850 503 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 CT45A2Q5DJT8 189 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 TCTN3Q6NUS6 607 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 H3F3CQ6NXT2 135 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 BNC2Q6ZN30 1099 aaPredicted RBP16.95■□□□□ 0.3
RFFL-211ENST00000584541 C16orf62Q7Z3J2 963 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 SERPINA11Q86U17 422 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 RPS19BP1Q86WX3 136 aaKnown RBP16.95■□□□□ 0.3
RFFL-211ENST00000584541 APLFQ8IW19 511 aaPredicted RBP16.95■□□□□ 0.3
RFFL-211ENST00000584541 ZNF441Q8N8Z8 693 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 SLC22A8Q8TCC7 542 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 XAGE5Q8WWM1 108 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 CDS1Q92903 461 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 OTUB1Q96FW1 271 aaPredicted RBP16.95■□□□□ 0.3
RFFL-211ENST00000584541 ZNF354BQ96LW1 612 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 BTBD10Q9BSF8 475 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 SPATA9Q9BWV2 254 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 NXF5Q9H1B4 397 aaKnown RBP16.95■□□□□ 0.3
RFFL-211ENST00000584541 SERHL2Q9H4I8 314 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 CDCP1Q9H5V8 836 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 KAT8Q9H7Z6 458 aaKnown RBP16.95■□□□□ 0.3
RFFL-211ENST00000584541 MRTO4Q9UKD2 239 aaKnown RBP16.95■□□□□ 0.3
RFFL-211ENST00000584541 KCNMB2Q9Y691 235 aa16.95■□□□□ 0.3
RFFL-211ENST00000584541 WWP2O00308 870 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 HMGN4O00479 90 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 DNAJA2O60884 412 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 AK1P00568 194 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 TRHRP34981 398 aaPredicted RBP16.94■□□□□ 0.3
RFFL-211ENST00000584541 KRT20P35900 424 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 EEFSECP57772 596 aaKnown RBP16.94■□□□□ 0.3
RFFL-211ENST00000584541 POU6F2P78424 691 aaPredicted RBP16.94■□□□□ 0.3
RFFL-211ENST00000584541 GNA13Q14344 377 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 ZSCAN26Q16670 478 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 MEP1AQ16819 746 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 CYP27C1Q4G0S4 372 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 EXOSC6Q5RKV6 272 aaKnown RBP16.94■□□□□ 0.3
RFFL-211ENST00000584541 GCNT6Q5T4J0 391 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 NPSR1Q6W5P4 371 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 GPR155Q7Z3F1 870 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 SLC15A3Q8IY34 581 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 SLC15A4Q8N697 577 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 SIRT6Q8N6T7 355 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 OR10A6Q8NH74 314 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 APOBEC4Q8WW27 367 aaKnown RBP16.94■□□□□ 0.3
RFFL-211ENST00000584541 RAB8BQ92930 207 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 SLC7A6OSQ96CW6 309 aaPredicted RBP16.94■□□□□ 0.3
RFFL-211ENST00000584541 SLC35A4Q96G79 324 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 CDRT15Q96T59 188 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 BTBD2Q9BX70 525 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 LIN28AQ9H9Z2 209 aaKnown RBP16.94■□□□□ 0.3
RFFL-211ENST00000584541 CMTM6Q9NX76 183 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 ABI3Q9P2A4 366 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 TMEM181Q9P2C4 612 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 ABCD2Q9UBJ2 740 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 P2RX2Q9UBL9 471 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 CBLCQ9ULV8 474 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 LIPT1Q9Y234 373 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 YARS2Q9Y2Z4 477 aaKnown RBP16.94■□□□□ 0.3
RFFL-211ENST00000584541 APC2O95996 2303 aa16.94■□□□□ 0.3
RFFL-211ENST00000584541 CPAMD8Q8IZJ3 1885 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 A6NL46 340 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 A8MVJ9 347 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 NME4O00746 187 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 TO15178 435 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 ITGA10O75578 1167 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 BMP2P12643 396 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 CCL11P51671 97 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 PSMD4P55036 377 aaKnown RBP16.93■□□□□ 0.3
RFFL-211ENST00000584541 MLF1P58340 268 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 HPCAP84074 193 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 DECR1Q16698 335 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 LACTB2Q53H82 288 aaPredicted RBP16.93■□□□□ 0.3
RFFL-211ENST00000584541 PIGGQ5H8A4 983 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 CRB2Q5IJ48 1285 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 SAMD4BQ5PRF9 694 aaKnown RBP16.93■□□□□ 0.3
RFFL-211ENST00000584541 ABHD17BQ5VST6 288 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 YTHDF3Q7Z739 585 aaKnown RBP16.93■□□□□ 0.3
RFFL-211ENST00000584541 SLC34A3Q8N130 599 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 ARHGAP24Q8N264 748 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 PIK3R3Q92569 461 aa16.93■□□□□ 0.3
RFFL-211ENST00000584541 RMND5BQ96G75 393 aaPredicted RBP16.93■□□□□ 0.3
RFFL-211ENST00000584541 PRPF19Q9UMS4 504 aaKnown RBP16.93■□□□□ 0.3
RFFL-211ENST00000584541 MED13Q9UHV7 2174 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 EXPH5Q8NEV8 1989 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 TMEM200CA6NKL6 621 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 C5orf58C9J3I9 102 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 TNFRSF21O75509 655 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 OR2J2O76002 312 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 NR2F1P10589 423 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 PIGAP37287 484 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 TMED10P49755 219 aaKnown RBP16.92■□□□□ 0.3
RFFL-211ENST00000584541 SSR4P51571 173 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 CXADRP78310 365 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 MRPS22P82650 360 aaKnown RBP16.92■□□□□ 0.3
RFFL-211ENST00000584541 LIPEQ05469 1076 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 RBBP4Q09028 425 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms